RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 PDE4CQ08493 712 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 FAM69CQ0P6D2 419 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 WDR44Q5JSH3 913 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 SLC9A9Q8IVB4 645 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 RETREG2Q8NC44 543 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 TSPAN10Q9H1Z9 355 aaPredicted RBP4.08□□□□□ -1.76
CD46-219ENST00000636114 PEG3Q9GZU2 1588 aa4.08□□□□□ -1.76
CD46-219ENST00000636114 SOBPA7XYQ1 873 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 POTECB2RU33 542 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 NBPF10Q6P3W6 841 aaKnown RBP4.07□□□□□ -1.76
CD46-219ENST00000636114 CLP1Q92989 425 aaKnown RBP4.07□□□□□ -1.76
CD46-219ENST00000636114 NIFKQ9BYG3 293 aaKnown RBP4.07□□□□□ -1.76
CD46-219ENST00000636114 BICRAQ9NZM4 1560 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 TMEM88BA6NKF7 163 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 POU4F2Q12837 409 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 C4orf17Q53FE4 359 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 ZNF295-AS1Q8N0V1 137 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 GAS2L2Q8NHY3 880 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 CABP1Q9NZU7 370 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 USP3Q9Y6I4 520 aa4.07□□□□□ -1.76
CD46-219ENST00000636114 ATAD2Q6PL18 1390 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 IGFBP4P22692 258 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 WEE1P30291 646 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 PLA2G4AP47712 749 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 PSMA6P60900 246 aaKnown RBP4.06□□□□□ -1.76
CD46-219ENST00000636114 TBCELQ5QJ74 424 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 SCG3Q8WXD2 468 aaKnown RBP4.06□□□□□ -1.76
CD46-219ENST00000636114 CHMP3Q9Y3E7 222 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 A0A1B0GTH6 734 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 C21orf2O43822 256 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 PPP1R12BO60237 982 aaPredicted RBP4.06□□□□□ -1.76
CD46-219ENST00000636114 PRMT3O60678 531 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 LGR5O75473 907 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 RHOQP17081 205 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 PTSQ03393 145 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 TEAD4Q15561 434 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 OCLNQ16625 522 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 ZNF787Q6DD87 383 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 STAG2Q8N3U4 1231 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 ZNF232Q9UNY5 417 aa4.06□□□□□ -1.76
CD46-219ENST00000636114 SERTM1A2A2V5 107 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 FOXO3O43524 673 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 PHKA2P46019 1235 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 HIRAP54198 1017 aaPredicted RBP4.05□□□□□ -1.76
CD46-219ENST00000636114 NBPF1Q3BBV0 1214 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 POTEAQ6S8J7 498 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 L3MBTL2Q969R5 705 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 TIMMDC1Q9NPL8 285 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 DYRK1BQ9Y463 629 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 SMARCA2P51531 1590 aa4.05□□□□□ -1.76
CD46-219ENST00000636114 SENP3-EIF4A1A0A087X0R7 540 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 EML1O00423 815 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 ATP2B4P23634 1241 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 NOS2P35228 1153 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 B4GALNT3Q6L9W6 998 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 C1orf216Q8TAB5 229 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 ZDHHC1Q8WTX9 485 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 CHMP7Q8WUX9 453 aaPredicted RBP4.04□□□□□ -1.76
CD46-219ENST00000636114 PRIMPOLQ96LW4 560 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 C2orf49Q9BVC5 232 aaPredicted RBP4.04□□□□□ -1.76
CD46-219ENST00000636114 ZDHHC3Q9NYG2 299 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 CXXC1Q9P0U4 656 aaPredicted RBP4.04□□□□□ -1.76
CD46-219ENST00000636114 CCDC88BA6NC98 1476 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 SLC35F4A4IF30 521 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 CCDC155Q8N6L0 562 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 AIDAQ96BJ3 306 aa4.04□□□□□ -1.76
CD46-219ENST00000636114 CARNS1A5YM72 827 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 TATP17735 454 aaPredicted RBP4.03□□□□□ -1.76
CD46-219ENST00000636114 FKBP5Q13451 457 aaPredicted RBP4.03□□□□□ -1.76
CD46-219ENST00000636114 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 VTI1AQ96AJ9 217 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 SLAIN2Q9P270 581 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 PARP3Q9Y6F1 533 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 EEA1Q15075 1411 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 ATAD2BQ9ULI0 1458 aa4.03□□□□□ -1.76
CD46-219ENST00000636114 F11P03951 625 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 ATP4AP20648 1035 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 SSFA2P28290 1259 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 SH3PXD2AQ5TCZ1 1133 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 COL26A1Q96A83 441 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 PSMG3-AS1Q96PY0 264 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 GAS2L1Q99501 681 aaPredicted RBP4.02□□□□□ -1.77
CD46-219ENST00000636114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.02□□□□□ -1.77
CD46-219ENST00000636114 NXF1Q9UBU9 619 aaKnown RBP4.02□□□□□ -1.77
CD46-219ENST00000636114 LOC105371045A0A1W2PR82 267 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 PTCD1O75127 700 aaKnown RBP4.02□□□□□ -1.77
CD46-219ENST00000636114 ITGA6P23229 1130 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 MSX1P28360 303 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 TXLNAP40222 546 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 C1orf53Q5VUE5 145 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 NPAS3Q8IXF0 933 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 PGBD3Q8N328 593 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 GPAMQ9HCL2 828 aa4.02□□□□□ -1.77
CD46-219ENST00000636114 GPC6Q9Y625 555 aaPredicted RBP4.02□□□□□ -1.77
CD46-219ENST00000636114 PPFIA3O75145 1194 aa4.01□□□□□ -1.77
CD46-219ENST00000636114 RIPOR1Q6ZS17 1223 aa4.01□□□□□ -1.77
CD46-219ENST00000636114 ALDH16A1Q8IZ83 802 aa4.01□□□□□ -1.77
CD46-219ENST00000636114 TRAIPQ9BWF2 469 aa4.01□□□□□ -1.77
CD46-219ENST00000636114 PHACTR1Q9C0D0 580 aa4.01□□□□□ -1.77
CD46-219ENST00000636114 CRISPLD1Q9H336 500 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms