RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CDCA7Q9BWT1 371 aaPredicted RBP5.1□□□□□ -1.59
PSPC1-208ENST00000635562 NIFKQ9BYG3 293 aaKnown RBP5.1□□□□□ -1.59
PSPC1-208ENST00000635562 ETNK1Q9HBU6 452 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 NDFIP2Q9NV92 336 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 PCDHGC4Q9Y5F7 938 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 SOX11P35716 441 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 WASHC4Q2M389 1173 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 FAM182BQ5T319 152 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 PHTF2Q8N3S3 785 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 ADAMTS19Q8TE59 1207 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 ABHD17AQ96GS6 310 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 GGA1Q9UJY5 639 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 CHIC2Q9UKJ5 165 aa5.09□□□□□ -1.59
PSPC1-208ENST00000635562 KRBA1A5PL33 1030 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 BNIP3LO60238 219 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 INHAP05111 366 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 EPXP11678 715 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 ADH6P28332 368 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 BAG6P46379 1132 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 PLA2G4AP47712 749 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 WWC1Q8IX03 1113 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 ZDHHC3Q9NYG2 299 aa5.08□□□□□ -1.6
PSPC1-208ENST00000635562 ATXN7O15265 892 aaPredicted RBP5.07□□□□□ -1.6
PSPC1-208ENST00000635562 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
PSPC1-208ENST00000635562 DGKGP49619 791 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 GDF10P55107 478 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 GRIN2CQ14957 1233 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 OXLD1Q5BKU9 147 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 LINC00114Q6XXX2 140 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 C1orf229Q6ZS94 237 aaPredicted RBP5.07□□□□□ -1.6
PSPC1-208ENST00000635562 GLMNQ92990 594 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 ALG2Q9H553 416 aa5.07□□□□□ -1.6
PSPC1-208ENST00000635562 C2CD2LO14523 706 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 ATP4AP20648 1035 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 COL8A1P27658 744 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 SMTNP53814 917 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 VAC14Q08AM6 782 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 LAMC2Q13753 1193 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 BTBD6Q96KE9 485 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 DNAAF2Q9NVR5 837 aaKnown RBP5.06□□□□□ -1.6
PSPC1-208ENST00000635562 SERPINA10Q9UK55 444 aa5.06□□□□□ -1.6
PSPC1-208ENST00000635562 SPDYE3A6NKU9 549 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 CDK2AP1O14519 115 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 LZTS3O60299 673 aaPredicted RBP5.05□□□□□ -1.6
PSPC1-208ENST00000635562 FAM157BP0CG42 384 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
PSPC1-208ENST00000635562 SCNN1DP51172 638 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 CTBSQ01459 385 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 SEMA3FQ13275 785 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 ARSJQ5FYB0 599 aaPredicted RBP5.05□□□□□ -1.6
PSPC1-208ENST00000635562 XP32Q5T750 250 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 CHSY3Q70JA7 882 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 PLPP7Q8NBV4 271 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 AIDAQ96BJ3 306 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 ZCCHC2Q9C0B9 1178 aaKnown RBP5.05□□□□□ -1.6
PSPC1-208ENST00000635562 GPC6Q9Y625 555 aaPredicted RBP5.05□□□□□ -1.6
PSPC1-208ENST00000635562 GJA3Q9Y6H8 435 aa5.05□□□□□ -1.6
PSPC1-208ENST00000635562 NEURL1BA8MQ27 555 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 BACH1O14867 736 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 MTFR1Q15390 333 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 HDGFL1Q5TGJ6 251 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 ZNF468Q5VIY5 522 aaPredicted RBP5.04□□□□□ -1.6
PSPC1-208ENST00000635562 CALR3Q96L12 384 aaKnown RBP5.04□□□□□ -1.6
PSPC1-208ENST00000635562 SLC4A9Q96Q91 983 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 ARID3AQ99856 593 aa5.04□□□□□ -1.6
PSPC1-208ENST00000635562 A0A1W2PNR3 127 aa5.03□□□□□ -1.6
PSPC1-208ENST00000635562 A6NJY4 79 aa5.03□□□□□ -1.6
PSPC1-208ENST00000635562 KHNYNO15037 678 aaKnown RBP5.03□□□□□ -1.6
PSPC1-208ENST00000635562 MAPTP10636 758 aaKnown RBP5.03□□□□□ -1.6
PSPC1-208ENST00000635562 TNP2Q05952 138 aa5.03□□□□□ -1.6
PSPC1-208ENST00000635562 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
PSPC1-208ENST00000635562 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
PSPC1-208ENST00000635562 DCDC2BA2VCK2 349 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 C1QTNF9BB2RNN3 333 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 SPATA31C1P0DKV0 1188 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 ALAS2P22557 587 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 SRPK2P78362 688 aaKnown RBP5.02□□□□□ -1.61
PSPC1-208ENST00000635562 EML3Q32P44 896 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 TSGA10IPQ3SY00 556 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 CD163Q86VB7 1156 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 MARK1Q9P0L2 795 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 PRR12Q9ULL5 1215 aa5.02□□□□□ -1.61
PSPC1-208ENST00000635562 CFAP70Q5T0N1 1121 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 BICDL1Q6ZP65 573 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 NFATC2IPQ8NCF5 419 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 SUV39H2Q9H5I1 410 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 CABP1Q9NZU7 370 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 IQSEC3Q9UPP2 1182 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-208ENST00000635562 NOD1Q9Y239 953 aa5.01□□□□□ -1.61
PSPC1-208ENST00000635562 ELOA3CA0A087WX78 387 aaPredicted RBP5□□□□□ -1.61
PSPC1-208ENST00000635562 ELOA3DA6NLF2 546 aaPredicted RBP5□□□□□ -1.61
PSPC1-208ENST00000635562 TMEM229AB2RXF0 380 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 EFSO43281 561 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 FURINP09958 794 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 CD33P20138 364 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 NEUROD1Q13562 356 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 ELOA3BQ3SY89 546 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 PRRT3Q5FWE3 981 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 FCHSD1Q86WN1 690 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms