RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
GPC3-204ENST00000631057 STAP2Q9UGK3 403 aa9.88□□□□□ -0.83
GPC3-204ENST00000631057 LRRFIP2Q9Y608 721 aaKnown RBP9.88□□□□□ -0.83
GPC3-204ENST00000631057 OVOS2A0A0G2JMS6 1433 aa9.87□□□□□ -0.83
GPC3-204ENST00000631057 NPHP4O75161 1426 aaPredicted RBP9.87□□□□□ -0.83
GPC3-204ENST00000631057 PNMA6EA0A0J9YXQ4 647 aa9.87□□□□□ -0.83
GPC3-204ENST00000631057 SSFA2P28290 1259 aa9.87□□□□□ -0.83
GPC3-204ENST00000631057 USHBP1Q8N6Y0 703 aa9.87□□□□□ -0.83
GPC3-204ENST00000631057 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
GPC3-204ENST00000631057 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
GPC3-204ENST00000631057 SLIT3O75094 1523 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 MCM2P49736 904 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 EIF4A1P60842 406 aaKnown RBP9.86□□□□□ -0.83
GPC3-204ENST00000631057 PSME1Q06323 249 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 SSH3Q8TE77 659 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 USP44Q9H0E7 712 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
GPC3-204ENST00000631057 KIF1AQ12756 1690 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
GPC3-204ENST00000631057 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
GPC3-204ENST00000631057 ANAPC15P60006 121 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 PLEKHO1Q53GL0 409 aaPredicted RBP9.85□□□□□ -0.83
GPC3-204ENST00000631057 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 TRPM3Q9HCF6 1732 aaPredicted RBP9.85□□□□□ -0.83
GPC3-204ENST00000631057 LMTK3Q96Q04 1460 aa9.85□□□□□ -0.83
GPC3-204ENST00000631057 CYP2E1P05181 493 aaPredicted RBP9.84□□□□□ -0.83
GPC3-204ENST00000631057 TEFQ10587 303 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 POLA2Q14181 598 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
GPC3-204ENST00000631057 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 CRYBG1Q9Y4K1 1723 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 CHMLP26374 656 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 KLHL40Q2TBA0 621 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 HSP90AB4PQ58FF6 505 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 ESCO1Q5FWF5 840 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 DNAAF4Q8WXU2 420 aa9.84□□□□□ -0.83
GPC3-204ENST00000631057 PHAXQ9H814 394 aaKnown RBP9.84□□□□□ -0.83
GPC3-204ENST00000631057 ADAMTS7Q9UKP4 1686 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 EIF2S2P20042 333 aaKnown RBP9.83□□□□□ -0.84
GPC3-204ENST00000631057 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 TSHZ3Q63HK5 1081 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 RILPL2Q969X0 211 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 KIF1BPQ96EK5 621 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
GPC3-204ENST00000631057 DDX49Q9Y6V7 483 aaKnown RBP9.83□□□□□ -0.84
GPC3-204ENST00000631057 SCN11AQ9UI33 1791 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 BTBD11A6QL63 1104 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
GPC3-204ENST00000631057 NEK4P51957 841 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 LGR6Q9HBX8 967 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 CHPF2Q9P2E5 772 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 HDAC5Q9UQL6 1122 aa9.82□□□□□ -0.84
GPC3-204ENST00000631057 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
GPC3-204ENST00000631057 ALDH1L1O75891 902 aa9.81□□□□□ -0.84
GPC3-204ENST00000631057 BEND3Q5T5X7 828 aa9.81□□□□□ -0.84
GPC3-204ENST00000631057 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
GPC3-204ENST00000631057 RHPN1Q8TCX5 695 aa9.81□□□□□ -0.84
GPC3-204ENST00000631057 DBF4Q9UBU7 674 aaPredicted RBP9.81□□□□□ -0.84
GPC3-204ENST00000631057 PXDNQ92626 1479 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 ADCY9O60503 1353 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 PI4KAP2A4QPH2 592 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 SRGAP3O43295 1099 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
GPC3-204ENST00000631057 GCP02774 474 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 CUL4AQ13619 759 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 PI4KAP1Q8N8J0 262 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 LRRC59Q96AG4 307 aaKnown RBP9.8□□□□□ -0.84
GPC3-204ENST00000631057 TMX3Q96JJ7 454 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 IL1RAPL2Q9NP60 686 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 TCHHQ07283 1943 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 MTX1Q13505 466 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 CNTROBQ8N137 903 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 ZGPATQ8N5A5 531 aaKnown RBP9.8□□□□□ -0.84
GPC3-204ENST00000631057 INTS4Q96HW7 963 aaKnown RBP9.8□□□□□ -0.84
GPC3-204ENST00000631057 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
GPC3-204ENST00000631057 MST1RQ04912 1400 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 USP42Q9H9J4 1324 aaKnown RBP9.79□□□□□ -0.84
GPC3-204ENST00000631057 HEG1Q9ULI3 1381 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 KCNQ3O43525 872 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 NBPF7P0C2Y1 421 aaPredicted RBP9.79□□□□□ -0.84
GPC3-204ENST00000631057 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 GAS2L3Q86XJ1 694 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 UNC5CLQ8IV45 518 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 PI4K2BQ8TCG2 481 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 ANKRD24Q8TF21 1146 aa9.79□□□□□ -0.84
GPC3-204ENST00000631057 RBM33Q96EV2 1170 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms