RNA–Protein interactions for RNA: ENST00000629232.1

PARP1-210, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 5 BASIC

Gene PARP1, Length 477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-210ENST00000629232 KCPQ6ZWJ8 1503 aa27.72■■■□□ 2.03
PARP1-210ENST00000629232 SIPA1L3O60292 1781 aaPredicted RBP27.71■■■□□ 2.03
PARP1-210ENST00000629232 GYS1P13807 737 aa27.71■■■□□ 2.03
PARP1-210ENST00000629232 ZNF790Q6PG37 636 aa27.71■■■□□ 2.03
PARP1-210ENST00000629232 TTC5Q8N0Z6 440 aa27.71■■■□□ 2.03
PARP1-210ENST00000629232 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
PARP1-210ENST00000629232 CYP19A1P11511 503 aaPredicted RBP27.7■■■□□ 2.02
PARP1-210ENST00000629232 RTF1Q92541 710 aaKnown RBP27.7■■■□□ 2.02
PARP1-210ENST00000629232 PLEKHF1Q96S99 279 aa27.7■■■□□ 2.02
PARP1-210ENST00000629232 UBR2Q8IWV8 1755 aa27.7■■■□□ 2.02
PARP1-210ENST00000629232 C4AP0C0L4 1744 aa27.7■■■□□ 2.02
PARP1-210ENST00000629232 KIAA1551Q9HCM1 1747 aa27.7■■■□□ 2.02
PARP1-210ENST00000629232 NEFMP07197 916 aa27.69■■■□□ 2.02
PARP1-210ENST00000629232 DPEP1P16444 411 aa27.69■■■□□ 2.02
PARP1-210ENST00000629232 MYBBP1AQ9BQG0 1328 aaKnown RBP27.68■■■□□ 2.02
PARP1-210ENST00000629232 APLP1P51693 650 aa27.68■■■□□ 2.02
PARP1-210ENST00000629232 TOMM70O94826 608 aa27.67■■■□□ 2.02
PARP1-210ENST00000629232 ZNF496Q96IT1 587 aaPredicted RBP27.66■■■□□ 2.02
PARP1-210ENST00000629232 TEX13AQ9BXU3 409 aaPredicted RBP27.66■■■□□ 2.02
PARP1-210ENST00000629232 BTBD11A6QL63 1104 aa27.65■■■□□ 2.02
PARP1-210ENST00000629232 MCM10Q7L590 875 aa27.64■■■□□ 2.02
PARP1-210ENST00000629232 HEG1Q9ULI3 1381 aa27.63■■■□□ 2.01
PARP1-210ENST00000629232 STARD3NLO95772 234 aa27.63■■■□□ 2.01
PARP1-210ENST00000629232 FMNL2Q96PY5 1086 aa27.63■■■□□ 2.01
PARP1-210ENST00000629232 PIM2Q9P1W9 311 aa27.62■■■□□ 2.01
PARP1-210ENST00000629232 SOS1Q07889 1333 aaPredicted RBP27.62■■■□□ 2.01
PARP1-210ENST00000629232 PRKRIP1Q9H875 184 aaPredicted RBP27.61■■■□□ 2.01
PARP1-210ENST00000629232 BRCA1P38398 1863 aaKnown RBP27.6■■■□□ 2.01
PARP1-210ENST00000629232 DCTN1Q14203 1278 aa27.6■■■□□ 2.01
PARP1-210ENST00000629232 NFE2L2Q16236 605 aa27.6■■■□□ 2.01
PARP1-210ENST00000629232 C16orf71Q8IYS4 520 aaPredicted RBP27.6■■■□□ 2.01
PARP1-210ENST00000629232 USP42Q9H9J4 1324 aaKnown RBP27.6■■■□□ 2.01
PARP1-210ENST00000629232 TAF7Q15545 349 aaPredicted RBP27.59■■■□□ 2.01
PARP1-210ENST00000629232 DALRD3Q5D0E6 543 aaKnown RBP27.59■■■□□ 2.01
PARP1-210ENST00000629232 C9orf131Q5VYM1 1079 aa27.59■■■□□ 2.01
PARP1-210ENST00000629232 NMRK2Q9NPI5 230 aa27.59■■■□□ 2.01
PARP1-210ENST00000629232 ZBTB1Q9Y2K1 713 aa27.59■■■□□ 2.01
PARP1-210ENST00000629232 DLG5Q8TDM6 1919 aa27.59■■■□□ 2.01
PARP1-210ENST00000629232 ARFGEF1Q9Y6D6 1849 aa27.58■■■□□ 2.01
PARP1-210ENST00000629232 KCNQ3O43525 872 aa27.58■■■□□ 2.01
PARP1-210ENST00000629232 SRP68Q9UHB9 627 aaKnown RBP27.58■■■□□ 2.01
PARP1-210ENST00000629232 KCNA3P22001 575 aa27.57■■■□□ 2
PARP1-210ENST00000629232 MAPK8IP3Q9UPT6 1336 aa27.57■■■□□ 2
PARP1-210ENST00000629232 ZPR1O75312 459 aa27.56■■■□□ 2
PARP1-210ENST00000629232 FKBP8Q14318 412 aa27.56■■■□□ 2
PARP1-210ENST00000629232 NARFQ9UHQ1 456 aa27.56■■■□□ 2
PARP1-210ENST00000629232 EIF5P55010 431 aaKnown RBP27.55■■■□□ 2
PARP1-210ENST00000629232 RBM46Q8TBY0 533 aaKnown RBP27.55■■■□□ 2
PARP1-210ENST00000629232 KDM2BQ8NHM5 1336 aa27.54■■■□□ 2
PARP1-210ENST00000629232 COL15A1P39059 1388 aa27.53■■■□□ 2
PARP1-210ENST00000629232 CANXP27824 592 aaKnown RBP27.53■■■□□ 2
PARP1-210ENST00000629232 TM4SF1P30408 202 aa27.53■■■□□ 2
PARP1-210ENST00000629232 DDR1Q08345 913 aa27.53■■■□□ 2
PARP1-210ENST00000629232 PNISRQ8TF01 805 aaKnown RBP27.53■■■□□ 2
PARP1-210ENST00000629232 A0A087WZG4 1122 aa27.52■■■□□ 2
PARP1-210ENST00000629232 SNRPA1P09661 255 aaKnown RBP27.52■■■□□ 2
PARP1-210ENST00000629232 USPL1Q5W0Q7 1092 aa27.52■■■□□ 2
PARP1-210ENST00000629232 RNF181Q9P0P0 153 aa27.52■■■□□ 2
PARP1-210ENST00000629232 IL6STP40189 918 aaPredicted RBP27.51■■□□□ 1.99
PARP1-210ENST00000629232 USP16Q9Y5T5 823 aa27.51■■□□□ 1.99
PARP1-210ENST00000629232 DNAJC5GQ8N7S2 189 aa27.5■■□□□ 1.99
PARP1-210ENST00000629232 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
PARP1-210ENST00000629232 CHRNA5P30532 468 aa27.49■■□□□ 1.99
PARP1-210ENST00000629232 POLRMTO00411 1230 aaKnown RBP27.48■■□□□ 1.99
PARP1-210ENST00000629232 A1BGP04217 495 aa27.48■■□□□ 1.99
PARP1-210ENST00000629232 TMPOP42166 694 aaKnown RBP27.48■■□□□ 1.99
PARP1-210ENST00000629232 RIPK4P57078 832 aa27.48■■□□□ 1.99
PARP1-210ENST00000629232 FSTL1Q12841 308 aa27.48■■□□□ 1.99
PARP1-210ENST00000629232 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
PARP1-210ENST00000629232 WDR43Q15061 677 aaKnown RBP eCLIP27.47■■□□□ 1.99
PARP1-210ENST00000629232 MIS18AQ9NYP9 233 aa27.47■■□□□ 1.99
PARP1-210ENST00000629232 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
PARP1-210ENST00000629232 WDR90Q96KV7 1748 aa27.45■■□□□ 1.99
PARP1-210ENST00000629232 RUNDC1Q96C34 613 aa27.45■■□□□ 1.98
PARP1-210ENST00000629232 PRAMEF22A3QJZ6 481 aa27.44■■□□□ 1.98
PARP1-210ENST00000629232 LMOD3Q0VAK6 560 aa27.44■■□□□ 1.98
PARP1-210ENST00000629232 THUMPD2Q9BTF0 503 aaKnown RBP27.44■■□□□ 1.98
PARP1-210ENST00000629232 NFIXQ14938 502 aa27.43■■□□□ 1.98
PARP1-210ENST00000629232 RRAGCQ9HB90 399 aa27.43■■□□□ 1.98
PARP1-210ENST00000629232 BABAM1Q9NWV8 329 aa27.43■■□□□ 1.98
PARP1-210ENST00000629232 NPM2Q86SE8 214 aaKnown RBP27.42■■□□□ 1.98
PARP1-210ENST00000629232 KDM3BQ7LBC6 1761 aa27.41■■□□□ 1.98
PARP1-210ENST00000629232 TNRC6CQ9HCJ0 1690 aaKnown RBP27.41■■□□□ 1.98
PARP1-210ENST00000629232 EIF4A1P60842 406 aaKnown RBP27.41■■□□□ 1.98
PARP1-210ENST00000629232 ZC3H4Q9UPT8 1303 aaKnown RBP27.41■■□□□ 1.98
PARP1-210ENST00000629232 SBF1O95248 1867 aa27.4■■□□□ 1.98
PARP1-210ENST00000629232 KLRG1Q96E93 195 aa27.4■■□□□ 1.98
PARP1-210ENST00000629232 TBC1D2BQ9UPU7 963 aa27.4■■□□□ 1.98
PARP1-210ENST00000629232 CCDC146Q8IYE0 955 aa27.39■■□□□ 1.98
PARP1-210ENST00000629232 ZNF330Q9Y3S2 320 aaPredicted RBP27.38■■□□□ 1.97
PARP1-210ENST00000629232 NBPF26B4DH59 902 aa27.37■■□□□ 1.97
PARP1-210ENST00000629232 SERPINB2P05120 415 aa27.37■■□□□ 1.97
PARP1-210ENST00000629232 NBPF10Q6P3W6 841 aaKnown RBP27.37■■□□□ 1.97
PARP1-210ENST00000629232 NBPF15Q8N660 670 aa27.37■■□□□ 1.97
PARP1-210ENST00000629232 SMC1BQ8NDV3 1235 aa27.37■■□□□ 1.97
PARP1-210ENST00000629232 RGL2O15211 777 aa27.36■■□□□ 1.97
PARP1-210ENST00000629232 CAMTA2O94983 1202 aa27.36■■□□□ 1.97
PARP1-210ENST00000629232 LMNB1P20700 586 aa27.36■■□□□ 1.97
PARP1-210ENST00000629232 HTRA3P83110 453 aa27.36■■□□□ 1.97
PARP1-210ENST00000629232 RASSF7Q02833 373 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms