RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 SBF1O95248 1867 aa9.45□□□□□ -0.9
SOX9-AS1-218ENST00000628742 GABBR2O75899 941 aa9.44□□□□□ -0.9
SOX9-AS1-218ENST00000628742 DPEP1P16444 411 aa9.44□□□□□ -0.9
SOX9-AS1-218ENST00000628742 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
SOX9-AS1-218ENST00000628742 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-218ENST00000628742 TJP1Q07157 1748 aa9.44□□□□□ -0.9
SOX9-AS1-218ENST00000628742 MRC1P22897 1456 aa9.43□□□□□ -0.9
SOX9-AS1-218ENST00000628742 USP42Q9H9J4 1324 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-218ENST00000628742 A0A0G2JLW4 131 aa9.43□□□□□ -0.9
SOX9-AS1-218ENST00000628742 TRAPPC3LQ5T215 181 aa9.43□□□□□ -0.9
SOX9-AS1-218ENST00000628742 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
SOX9-AS1-218ENST00000628742 DLEC1Q9Y238 1755 aa9.42□□□□□ -0.9
SOX9-AS1-218ENST00000628742 TM4SF1P30408 202 aa9.42□□□□□ -0.9
SOX9-AS1-218ENST00000628742 EIF4A2Q14240 407 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-218ENST00000628742 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 DDR1Q08345 913 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 COL13A1Q5TAT6 717 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 C9orf131Q5VYM1 1079 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 PIM2Q9P1W9 311 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
SOX9-AS1-218ENST00000628742 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
SOX9-AS1-218ENST00000628742 POLRMTO00411 1230 aaKnown RBP9.4□□□□□ -0.9
SOX9-AS1-218ENST00000628742 FCHSD2O94868 740 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 CLCN6P51797 869 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 PRELPP51888 382 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 AMOTQ4VCS5 1084 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 TIMELESSQ9UNS1 1208 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 SCN11AQ9UI33 1791 aa9.39□□□□□ -0.91
SOX9-AS1-218ENST00000628742 RFC4P35249 363 aa9.38□□□□□ -0.91
SOX9-AS1-218ENST00000628742 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-218ENST00000628742 NUBP1P53384 320 aa9.38□□□□□ -0.91
SOX9-AS1-218ENST00000628742 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
SOX9-AS1-218ENST00000628742 PARP3Q9Y6F1 533 aa9.38□□□□□ -0.91
SOX9-AS1-218ENST00000628742 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-218ENST00000628742 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
SOX9-AS1-218ENST00000628742 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-218ENST00000628742 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
SOX9-AS1-218ENST00000628742 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
SOX9-AS1-218ENST00000628742 POTECB2RU33 542 aa9.36□□□□□ -0.91
SOX9-AS1-218ENST00000628742 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-218ENST00000628742 LMNB1P20700 586 aa9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 HTRA3P83110 453 aa9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 RNF181Q9P0P0 153 aa9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-218ENST00000628742 LTBP3Q9NS15 1303 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 TIAM2Q8IVF5 1701 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 NFKBIEO00221 500 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 CYP19A1P11511 503 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 CHRNA5P30532 468 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 CABP4P57796 275 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 NARFQ9UHQ1 456 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 DICER1Q9UPY3 1922 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
SOX9-AS1-218ENST00000628742 IL13P35225 146 aa9.33□□□□□ -0.92
SOX9-AS1-218ENST00000628742 NFIXQ14938 502 aa9.33□□□□□ -0.92
SOX9-AS1-218ENST00000628742 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
SOX9-AS1-218ENST00000628742 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
SOX9-AS1-218ENST00000628742 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
SOX9-AS1-218ENST00000628742 SCN7AQ01118 1682 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 ANKRD31Q8N7Z5 1873 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 PPM1GO15355 546 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 MTHFSP49914 203 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 C16orf71Q8IYS4 520 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 SLC52A2Q9HAB3 445 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 COL15A1P39059 1388 aa9.32□□□□□ -0.92
SOX9-AS1-218ENST00000628742 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 ADAMTSL1Q8N6G6 1762 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
SOX9-AS1-218ENST00000628742 HSPA1AP0DMV8 641 aaKnown RBP9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 HSPA1BP0DMV9 641 aaKnown RBP9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 RASSF7Q02833 373 aa9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 USPL1Q5W0Q7 1092 aa9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 SNED1Q8TER0 1413 aa9.3□□□□□ -0.92
SOX9-AS1-218ENST00000628742 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-218ENST00000628742 KLRG2A4D1S0 409 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms