RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 HEG1Q9ULI3 1381 aa9.59□□□□□ -0.87
PTP4A1-206ENST00000627002 TNS2Q63HR2 1409 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 KDM3BQ7LBC6 1761 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 TCERG1O14776 1098 aaKnown RBP9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 KCNQ3O43525 872 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 USP21Q9UK80 565 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 SCN11AQ9UI33 1791 aa9.58□□□□□ -0.88
PTP4A1-206ENST00000627002 ABCC4O15439 1325 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 DDB1Q16531 1140 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 FMNL2Q96PY5 1086 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 BCL9LQ86UU0 1499 aa9.57□□□□□ -0.88
PTP4A1-206ENST00000627002 SIPA1L3O60292 1781 aaPredicted RBP9.56□□□□□ -0.88
PTP4A1-206ENST00000627002 SLC39A6Q13433 755 aa9.56□□□□□ -0.88
PTP4A1-206ENST00000627002 TMEM57Q8N5G2 664 aa9.56□□□□□ -0.88
PTP4A1-206ENST00000627002 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
PTP4A1-206ENST00000627002 DBF4Q9UBU7 674 aaPredicted RBP9.56□□□□□ -0.88
PTP4A1-206ENST00000627002 SNRPA1P09661 255 aaKnown RBP9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 EIF2S2P20042 333 aaKnown RBP9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 FLIIQ13045 1269 aa9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
PTP4A1-206ENST00000627002 CCT4P50991 539 aaKnown RBP9.54□□□□□ -0.88
PTP4A1-206ENST00000627002 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
PTP4A1-206ENST00000627002 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
PTP4A1-206ENST00000627002 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
PTP4A1-206ENST00000627002 WNK3Q9BYP7 1800 aa9.54□□□□□ -0.88
PTP4A1-206ENST00000627002 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 FKBP5Q13451 457 aaPredicted RBP9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 G2E3Q7L622 706 aa9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 CHPF2Q9P2E5 772 aa9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 ERBB4Q15303 1308 aa9.53□□□□□ -0.88
PTP4A1-206ENST00000627002 BCL9O00512 1426 aa9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 ZBTB7BO15156 539 aaPredicted RBP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 PIGBQ92521 554 aa9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 DDX21Q9NR30 783 aaKnown RBP eCLIP9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 PXDNLA1KZ92 1463 aa9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 KDM2BQ8NHM5 1336 aa9.52□□□□□ -0.89
PTP4A1-206ENST00000627002 ATRNO75882 1429 aa9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 MARCH10Q8NA82 808 aaPredicted RBP9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 GJD4Q96KN9 370 aaPredicted RBP9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
PTP4A1-206ENST00000627002 VIRMAQ69YN4 1812 aaKnown RBP9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 PDIA6Q15084 440 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 SLC4A10Q6U841 1118 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 ATG3Q9NT62 314 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 TOGARAM1Q9Y4F4 1720 aa9.5□□□□□ -0.89
PTP4A1-206ENST00000627002 A0A0G2JS52 829 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 F6X3S4 739 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 MYT1Q01538 1121 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 KSR2Q6VAB6 950 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 DNAAF4Q8WXU2 420 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 SYTL4Q96C24 671 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 ASAP1Q9ULH1 1129 aa9.49□□□□□ -0.89
PTP4A1-206ENST00000627002 ATP10DQ9P241 1426 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 IGHDP01880 384 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 GNAI3P08754 354 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 PROSER3Q2NL68 480 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 SMARCC1Q92922 1105 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 GLI3P10071 1580 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 THSD7AQ9UPZ6 1657 aa9.48□□□□□ -0.89
PTP4A1-206ENST00000627002 UBR2Q8IWV8 1755 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 ALDH1L1O75891 902 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 STARD3NLO95772 234 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 ANXA1P04083 346 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 MYL6BP14649 208 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 C5P01031 1676 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 ADCY9O60503 1353 aa9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
PTP4A1-206ENST00000627002 LAMB4A4D0S4 1761 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 GNAI2P04899 355 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 AIMP1Q12904 312 aaKnown RBP9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 BEND3Q5T5X7 828 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms