RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	HSPA6	P17066	643 aa		34.02	■■■■□ 3.04
R3HDM4-208	ENST00000626716	ZBTB1	Q9Y2K1	713 aa		34.02	■■■■□ 3.04
R3HDM4-208	ENST00000626716	ARFGEF1	Q9Y6D6	1849 aa		34.02	■■■■□ 3.04
R3HDM4-208	ENST00000626716	COL3A1	P02461	1466 aa	Predicted RBP	34	■■■■□ 3.03
R3HDM4-208	ENST00000626716	CHRNA5	P30532	468 aa		33.99	■■■■□ 3.03
R3HDM4-208	ENST00000626716	TTC5	Q8N0Z6	440 aa		33.99	■■■■□ 3.03
R3HDM4-208	ENST00000626716	COL15A1	P39059	1388 aa		33.98	■■■■□ 3.03
R3HDM4-208	ENST00000626716	GNAT3	A8MTJ3	354 aa		33.98	■■■■□ 3.03
R3HDM4-208	ENST00000626716	GAS2L2	Q8NHY3	880 aa		33.98	■■■■□ 3.03
R3HDM4-208	ENST00000626716	STARD3NL	O95772	234 aa		33.97	■■■■□ 3.03
R3HDM4-208	ENST00000626716	NFIX	Q14938	502 aa		33.97	■■■■□ 3.03
R3HDM4-208	ENST00000626716	IL17RE	Q8NFR9	667 aa		33.97	■■■■□ 3.03
R3HDM4-208	ENST00000626716	TEF	Q10587	303 aa		33.96	■■■■□ 3.03
R3HDM4-208	ENST00000626716	C9orf131	Q5VYM1	1079 aa		33.96	■■■■□ 3.03
R3HDM4-208	ENST00000626716	UBR2	Q8IWV8	1755 aa		33.95	■■■■□ 3.03
R3HDM4-208	ENST00000626716	CANX	P27824	592 aa	Known RBP	33.95	■■■■□ 3.03
R3HDM4-208	ENST00000626716	BCL2L12	Q9HB09	334 aa		33.94	■■■■□ 3.02
R3HDM4-208	ENST00000626716	AFDN	P55196	1824 aa	Known RBP	33.93	■■■■□ 3.02
R3HDM4-208	ENST00000626716	ZNF790	Q6PG37	636 aa		33.92	■■■■□ 3.02
R3HDM4-208	ENST00000626716	ZNF496	Q96IT1	587 aa	Predicted RBP	33.92	■■■■□ 3.02
R3HDM4-208	ENST00000626716	SERPINB2	P05120	415 aa		33.91	■■■■□ 3.02
R3HDM4-208	ENST00000626716	EIF5	P55010	431 aa	Known RBP	33.91	■■■■□ 3.02
R3HDM4-208	ENST00000626716	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.91	■■■■□ 3.02
R3HDM4-208	ENST00000626716	TOMM70	O94826	608 aa		33.9	■■■■□ 3.02
R3HDM4-208	ENST00000626716	CFAP53	Q96M91	514 aa		33.9	■■■■□ 3.02
R3HDM4-208	ENST00000626716		A0A087WZG4	1122 aa		33.89	■■■■□ 3.02
R3HDM4-208	ENST00000626716	NMRK2	Q9NPI5	230 aa		33.88	■■■■□ 3.01
R3HDM4-208	ENST00000626716	HEG1	Q9ULI3	1381 aa		33.87	■■■■□ 3.01
R3HDM4-208	ENST00000626716	PHACTR3	Q96KR7	559 aa		33.87	■■■■□ 3.01
R3HDM4-208	ENST00000626716	NRXN2	Q9P2S2	1712 aa		33.87	■■■■□ 3.01
R3HDM4-208	ENST00000626716	RNF181	Q9P0P0	153 aa		33.86	■■■■□ 3.01
R3HDM4-208	ENST00000626716	SIPA1L3	O60292	1781 aa	Predicted RBP	33.85	■■■■□ 3.01
R3HDM4-208	ENST00000626716	PRKAR2B	P31323	418 aa		33.85	■■■■□ 3.01
R3HDM4-208	ENST00000626716	SBF1	O95248	1867 aa		33.84	■■■■□ 3.01
R3HDM4-208	ENST00000626716	FMNL2	Q96PY5	1086 aa		33.84	■■■■□ 3.01
R3HDM4-208	ENST00000626716	RSPH6A	Q9H0K4	717 aa		33.84	■■■■□ 3.01
R3HDM4-208	ENST00000626716	NUDC	Q9Y266	331 aa		33.84	■■■■□ 3.01
R3HDM4-208	ENST00000626716	BICDL1	Q6ZP65	573 aa		33.83	■■■■□ 3.01
R3HDM4-208	ENST00000626716	CEMIP	Q8WUJ3	1361 aa		33.83	■■■■□ 3.01
R3HDM4-208	ENST00000626716	KDM2B	Q8NHM5	1336 aa		33.8	■■■■□ 3
R3HDM4-208	ENST00000626716	BTBD11	A6QL63	1104 aa		33.8	■■■■□ 3
R3HDM4-208	ENST00000626716	IL6ST	P40189	918 aa	Predicted RBP	33.8	■■■■□ 3
R3HDM4-208	ENST00000626716	APLP1	P51693	650 aa		33.8	■■■■□ 3
R3HDM4-208	ENST00000626716	C2CD5	Q86YS7	1000 aa		33.8	■■■■□ 3
R3HDM4-208	ENST00000626716	TTLL6	Q8N841	843 aa		33.8	■■■■□ 3
R3HDM4-208	ENST00000626716		H0YIN7	160 aa		33.79	■■■■□ 3
R3HDM4-208	ENST00000626716	TBC1D9B	Q66K14	1250 aa		33.79	■■■■□ 3
R3HDM4-208	ENST00000626716	TBC1D2B	Q9UPU7	963 aa		33.79	■■■■□ 3
R3HDM4-208	ENST00000626716	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.79	■■■■□ 3
R3HDM4-208	ENST00000626716	KCNQ3	O43525	872 aa		33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	A1BG	P04217	495 aa		33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	PPP2R1A	P30153	589 aa		33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	NPM2	Q86SE8	214 aa	Known RBP	33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.77	■■■■□ 3
R3HDM4-208	ENST00000626716	DLEC1	Q9Y238	1755 aa		33.76	■■■■□ 3
R3HDM4-208	ENST00000626716	RBM46	Q8TBY0	533 aa	Known RBP	33.76	■■■□□ 2.99
R3HDM4-208	ENST00000626716	CARMIL3	Q8ND23	1372 aa		33.74	■■■□□ 2.99
R3HDM4-208	ENST00000626716	RASSF7	Q02833	373 aa		33.74	■■■□□ 2.99
R3HDM4-208	ENST00000626716	RTF1	Q92541	710 aa	Known RBP	33.73	■■■□□ 2.99
R3HDM4-208	ENST00000626716	RRAGC	Q9HB90	399 aa		33.73	■■■□□ 2.99
R3HDM4-208	ENST00000626716	LMNB1	P20700	586 aa		33.72	■■■□□ 2.99
R3HDM4-208	ENST00000626716	BRIP1	Q9BX63	1249 aa		33.72	■■■□□ 2.99
R3HDM4-208	ENST00000626716	PDZRN3	Q9UPQ7	1066 aa		33.72	■■■□□ 2.99
R3HDM4-208	ENST00000626716	PDE6B	P35913	854 aa		33.71	■■■□□ 2.99
R3HDM4-208	ENST00000626716	USP16	Q9Y5T5	823 aa		33.71	■■■□□ 2.99
R3HDM4-208	ENST00000626716	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.71	■■■□□ 2.99
R3HDM4-208	ENST00000626716	SETDB2	Q96T68	719 aa		33.7	■■■□□ 2.99
R3HDM4-208	ENST00000626716	SCN7A	Q01118	1682 aa		33.69	■■■□□ 2.98
R3HDM4-208	ENST00000626716	CAMTA2	O94983	1202 aa		33.69	■■■□□ 2.98
R3HDM4-208	ENST00000626716	PRR5L	Q6MZQ0	368 aa		33.69	■■■□□ 2.98
R3HDM4-208	ENST00000626716	MCM10	Q7L590	875 aa		33.69	■■■□□ 2.98
R3HDM4-208	ENST00000626716	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
R3HDM4-208	ENST00000626716	ANKRD31	Q8N7Z5	1873 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	PRELP	P51888	382 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	FSTL1	Q12841	308 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	CCDC24	Q8N4L8	307 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	DNAJC5G	Q8N7S2	189 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	CCDC88A	Q3V6T2	1871 aa		33.67	■■■□□ 2.98
R3HDM4-208	ENST00000626716	HTATSF1	O43719	755 aa	Known RBP	33.66	■■■□□ 2.98
R3HDM4-208	ENST00000626716	SNRPA1	P09661	255 aa	Known RBP	33.66	■■■□□ 2.98
R3HDM4-208	ENST00000626716	DZIP3	Q86Y13	1208 aa	Known RBP	33.66	■■■□□ 2.98
R3HDM4-208	ENST00000626716	PRAMEF22	A3QJZ6	481 aa		33.64	■■■□□ 2.98
R3HDM4-208	ENST00000626716	NFKBIE	O00221	500 aa		33.64	■■■□□ 2.98
R3HDM4-208	ENST00000626716	IFFO2	Q5TF58	517 aa		33.64	■■■□□ 2.98
R3HDM4-208	ENST00000626716	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.64	■■■□□ 2.98
R3HDM4-208	ENST00000626716	GLTPD2	A6NH11	291 aa		33.63	■■■□□ 2.97
R3HDM4-208	ENST00000626716	NPHP1	O15259	732 aa		33.63	■■■□□ 2.97
R3HDM4-208	ENST00000626716	DCTN1	Q14203	1278 aa		33.63	■■■□□ 2.97
R3HDM4-208	ENST00000626716	CNBD1	Q8NA66	436 aa		33.63	■■■□□ 2.97
R3HDM4-208	ENST00000626716	PIP4K2A	P48426	406 aa	Predicted RBP	33.62	■■■□□ 2.97
R3HDM4-208	ENST00000626716	C21orf2	O43822	256 aa		33.6	■■■□□ 2.97
R3HDM4-208	ENST00000626716	ST5	P78524	1137 aa		33.6	■■■□□ 2.97
R3HDM4-208	ENST00000626716	CLEC4G	Q6UXB4	293 aa		33.6	■■■□□ 2.97
R3HDM4-208	ENST00000626716	TAF7	Q15545	349 aa	Predicted RBP	33.59	■■■□□ 2.97
R3HDM4-208	ENST00000626716	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.59	■■■□□ 2.97
R3HDM4-208	ENST00000626716	VEGFA	P15692	232 aa	Predicted RBP	33.58	■■■□□ 2.97
R3HDM4-208	ENST00000626716	BCOR	Q6W2J9	1755 aa		33.57	■■■□□ 2.97
R3HDM4-208	ENST00000626716	CNKSR1	Q969H4	720 aa		33.57	■■■□□ 2.96

Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms