RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
KCNMA1-225ENST00000626620 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
KCNMA1-225ENST00000626620 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
KCNMA1-225ENST00000626620 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
KCNMA1-225ENST00000626620 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
KCNMA1-225ENST00000626620 PDIA6Q15084 440 aa13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 NBPF14Q5TI25 921 aa13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 HOXB7P09629 217 aa13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 SIK1P57059 783 aa13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
KCNMA1-225ENST00000626620 BCORQ6W2J9 1755 aa13.73□□□□□ -0.21
KCNMA1-225ENST00000626620 N4BP2Q86UW6 1770 aaPredicted RBP13.73□□□□□ -0.21
KCNMA1-225ENST00000626620 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
KCNMA1-225ENST00000626620 SLC15A2Q16348 729 aa13.73□□□□□ -0.21
KCNMA1-225ENST00000626620 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
KCNMA1-225ENST00000626620 CYP19A1P11511 503 aaPredicted RBP13.72□□□□□ -0.21
KCNMA1-225ENST00000626620 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
KCNMA1-225ENST00000626620 KIAA1551Q9HCM1 1747 aa13.72□□□□□ -0.21
KCNMA1-225ENST00000626620 INTS5Q6P9B9 1019 aaKnown RBP13.71□□□□□ -0.21
KCNMA1-225ENST00000626620 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.22
KCNMA1-225ENST00000626620 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.22
KCNMA1-225ENST00000626620 ZNF827Q17R98 1081 aa13.71□□□□□ -0.22
KCNMA1-225ENST00000626620 CHD4Q14839 1912 aa13.71□□□□□ -0.22
KCNMA1-225ENST00000626620 KIF13BQ9NQT8 1826 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 AMIGO3Q86WK7 504 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 KCNQ4P56696 695 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 SPON1Q9HCB6 807 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
KCNMA1-225ENST00000626620 GOLGB1Q14789 3259 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-225ENST00000626620 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
KCNMA1-225ENST00000626620 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
KCNMA1-225ENST00000626620 RARSP54136 660 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-225ENST00000626620 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-225ENST00000626620 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 PNPLA7Q6ZV29 1317 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 NUP98P52948 1817 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 A1BGP04217 495 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
KCNMA1-225ENST00000626620 CRKLP46109 303 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-225ENST00000626620 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
KCNMA1-225ENST00000626620 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-225ENST00000626620 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
KCNMA1-225ENST00000626620 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
KCNMA1-225ENST00000626620 DDX21Q9NR30 783 aaKnown RBP eCLIP13.63□□□□□ -0.23
KCNMA1-225ENST00000626620 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
KCNMA1-225ENST00000626620 G2E3Q7L622 706 aa13.63□□□□□ -0.23
KCNMA1-225ENST00000626620 BCAR3O75815 825 aa13.62□□□□□ -0.23
KCNMA1-225ENST00000626620 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
KCNMA1-225ENST00000626620 STK32BQ9NY57 414 aa13.62□□□□□ -0.23
KCNMA1-225ENST00000626620 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
KCNMA1-225ENST00000626620 BRCA1P38398 1863 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 STARD3NLO95772 234 aa13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 ANXA1P04083 346 aa13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 IL6STP40189 918 aaPredicted RBP13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 DBF4Q9UBU7 674 aaPredicted RBP13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 ADCY9O60503 1353 aa13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 SMIM5Q71RC9 77 aa13.61□□□□□ -0.23
KCNMA1-225ENST00000626620 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 ZBTB7AO95365 584 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
KCNMA1-225ENST00000626620 SYT17Q9BSW7 474 aa13.59□□□□□ -0.23
KCNMA1-225ENST00000626620 COL15A1P39059 1388 aa13.59□□□□□ -0.23
KCNMA1-225ENST00000626620 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
KCNMA1-225ENST00000626620 AFDNP55196 1824 aaKnown RBP13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 HYPKQ9NX55 129 aa13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 PXDNLA1KZ92 1463 aa13.58□□□□□ -0.24
KCNMA1-225ENST00000626620 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms