RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	COL8A1	P27658	744 aa		10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	ALYREF	Q86V81	257 aa	Known RBP	10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	PGBD3	Q8N328	593 aa		10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	GOLGA6L1	Q8N7Z2	621 aa		10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP17L5	A8MUK1	530 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	C2CD2L	O14523	706 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	ESCO1	Q5FWF5	840 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	PLEKHM2	Q8IWE5	1019 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	PLPP7	Q8NBV4	271 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	RRAGC	Q9HB90	399 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	NDFIP2	Q9NV92	336 aa		10.76	□□□□□ -0.69
NRXN1-223	ENST00000625891	HOXB4	P17483	251 aa	Predicted RBP	10.75	□□□□□ -0.69
NRXN1-223	ENST00000625891	MAP7D1	Q3KQU3	841 aa		10.75	□□□□□ -0.69
NRXN1-223	ENST00000625891	EFHC2	Q5JST6	749 aa		10.75	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP17L3	A6NCW0	530 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP17L4	A6NCW7	530 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891		K7ELQ4	463 aa	Predicted RBP	10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	BMP4	P12644	408 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	LMOD1	P29536	600 aa	Predicted RBP	10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	BAG6	P46379	1132 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP17L2	Q6R6M4	530 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	LINC00114	Q6XXX2	140 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP17L1	Q7RTZ2	530 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	ABHD17A	Q96GS6	310 aa		10.74	□□□□□ -0.69
NRXN1-223	ENST00000625891	BNIP3L	O60238	219 aa		10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	CTBS	Q01459	385 aa		10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	RHBDD1	Q8TEB9	315 aa		10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	CRISPLD1	Q9H336	500 aa		10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	ETNK1	Q9HBU6	452 aa		10.73	□□□□□ -0.69
NRXN1-223	ENST00000625891	STAU1	O95793	577 aa	Known RBP	10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	FGFR3	P22607	806 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	RFX1	P22670	979 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	USP4	Q13107	963 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	NCOA4	Q13772	614 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	KANK4	Q5T7N3	995 aa	Predicted RBP	10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	SLCO4C1	Q6ZQN7	724 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	DEPDC4	Q8N2C3	294 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	GGA1	Q9UJY5	639 aa		10.72	□□□□□ -0.69
NRXN1-223	ENST00000625891	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.71	□□□□□ -0.69
NRXN1-223	ENST00000625891	DOLK	Q9UPQ8	538 aa		10.71	□□□□□ -0.69
NRXN1-223	ENST00000625891	LZTS3	O60299	673 aa	Predicted RBP	10.7	□□□□□ -0.7
NRXN1-223	ENST00000625891	TLR1	Q15399	786 aa		10.7	□□□□□ -0.7
NRXN1-223	ENST00000625891	HOMEZ	Q8IX15	550 aa		10.7	□□□□□ -0.7
NRXN1-223	ENST00000625891	PBXIP1	Q96AQ6	731 aa		10.7	□□□□□ -0.7
NRXN1-223	ENST00000625891	SUV39H2	Q9H5I1	410 aa		10.7	□□□□□ -0.7
NRXN1-223	ENST00000625891	PPP1R15A	O75807	674 aa	Predicted RBP	10.69	□□□□□ -0.7
NRXN1-223	ENST00000625891	AMPD1	P23109	780 aa		10.69	□□□□□ -0.7
NRXN1-223	ENST00000625891	GRIN2C	Q14957	1233 aa		10.69	□□□□□ -0.7
NRXN1-223	ENST00000625891	EPX	P11678	715 aa		10.68	□□□□□ -0.7
NRXN1-223	ENST00000625891	BTBD6	Q96KE9	485 aa		10.68	□□□□□ -0.7
NRXN1-223	ENST00000625891	DNAAF2	Q9NVR5	837 aa	Known RBP	10.68	□□□□□ -0.7
NRXN1-223	ENST00000625891	FURIN	P09958	794 aa		10.67	□□□□□ -0.7
NRXN1-223	ENST00000625891	EML3	Q32P44	896 aa		10.67	□□□□□ -0.7
NRXN1-223	ENST00000625891	GNB5	O14775	395 aa		10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	ARAF	P10398	606 aa		10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	PLA2G4A	P47712	749 aa		10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	OXLD1	Q5BKU9	147 aa		10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	FIGNL1	Q6PIW4	674 aa		10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	MKRN1	Q9UHC7	482 aa	Known RBP	10.66	□□□□□ -0.7
NRXN1-223	ENST00000625891	PIK3R2	O00459	728 aa		10.65	□□□□□ -0.7
NRXN1-223	ENST00000625891	VRTN	Q9H8Y1	702 aa		10.65	□□□□□ -0.7
NRXN1-223	ENST00000625891	PCDHGC4	Q9Y5F7	938 aa		10.65	□□□□□ -0.7
NRXN1-223	ENST00000625891	ATP4A	P20648	1035 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	DGKG	P49619	791 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	SCNN1D	P51172	638 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	NLRP8	Q86W28	1048 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	C1orf216	Q8TAB5	229 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	SIRT1	Q96EB6	747 aa		10.64	□□□□□ -0.71
NRXN1-223	ENST00000625891	NEURL1B	A8MQ27	555 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	ATG7	O95352	703 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	INHA	P05111	366 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	CLDN10	P78369	228 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	CDCA8	Q53HL2	280 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	NOD1	Q9Y239	953 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	PCDHGA11	Q9Y5H2	935 aa		10.63	□□□□□ -0.71
NRXN1-223	ENST00000625891	C1QTNF9B	B2RNN3	333 aa		10.62	□□□□□ -0.71
NRXN1-223	ENST00000625891	GDF10	P55107	478 aa		10.62	□□□□□ -0.71
NRXN1-223	ENST00000625891	CRTC2	Q53ET0	693 aa	Predicted RBP	10.62	□□□□□ -0.71
NRXN1-223	ENST00000625891	HCN2	Q9UL51	889 aa		10.62	□□□□□ -0.71
NRXN1-223	ENST00000625891	FAM196B	A6NMK8	535 aa		10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	ZBTB7B	O15156	539 aa	Predicted RBP	10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	ATXN7	O15265	892 aa	Predicted RBP	10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	DKK1	O94907	266 aa		10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	CD163	Q86VB7	1156 aa		10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	NIFK	Q9BYG3	293 aa	Known RBP	10.61	□□□□□ -0.71
NRXN1-223	ENST00000625891	GTF2I	P78347	998 aa		10.6	□□□□□ -0.71
NRXN1-223	ENST00000625891	PTK7	Q13308	1070 aa		10.6	□□□□□ -0.71
NRXN1-223	ENST00000625891	AIDA	Q96BJ3	306 aa		10.6	□□□□□ -0.71
NRXN1-223	ENST00000625891	KLF15	Q9UIH9	416 aa		10.6	□□□□□ -0.71
NRXN1-223	ENST00000625891	KIAA1024	Q9UPX6	916 aa		10.6	□□□□□ -0.71
NRXN1-223	ENST00000625891	SMTN	P53814	917 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	TNP2	Q05952	138 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	ELOA	Q14241	798 aa	Known RBP	10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	FAM182B	Q5T319	152 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	TRIM50	Q86XT4	487 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891		Q8N3U1	123 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	OGFOD1	Q8N543	542 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms