RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 KIF14Q15058 1648 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 ACBD3Q9H3P7 528 aa13□□□□□ -0.33
VPS8-227ENST00000625842 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
VPS8-227ENST00000625842 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
VPS8-227ENST00000625842 GPTP24298 496 aa13□□□□□ -0.33
VPS8-227ENST00000625842 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
VPS8-227ENST00000625842 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
VPS8-227ENST00000625842 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
VPS8-227ENST00000625842 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS8-227ENST00000625842 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 CCDC39Q9UFE4 941 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 RPRD2Q5VT52 1461 aaKnown RBP12.99□□□□□ -0.33
VPS8-227ENST00000625842 EPB41L2O43491 1005 aaKnown RBP12.99□□□□□ -0.33
VPS8-227ENST00000625842 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS8-227ENST00000625842 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 TANGO6Q9C0B7 1094 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 PRKAG2Q9UGJ0 569 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
VPS8-227ENST00000625842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
VPS8-227ENST00000625842 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
VPS8-227ENST00000625842 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
VPS8-227ENST00000625842 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
VPS8-227ENST00000625842 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 GOLGA6L3A6NEY3 463 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 GNPATO15228 680 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 TNFAIP1Q13829 316 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
VPS8-227ENST00000625842 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 NSD2O96028 1365 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
VPS8-227ENST00000625842 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
VPS8-227ENST00000625842 GNAQP50148 359 aa12.96□□□□□ -0.33
VPS8-227ENST00000625842 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
VPS8-227ENST00000625842 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
VPS8-227ENST00000625842 ACEP12821 1306 aa12.96□□□□□ -0.33
VPS8-227ENST00000625842 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
VPS8-227ENST00000625842 ARHGEF11O15085 1522 aa12.96□□□□□ -0.33
VPS8-227ENST00000625842 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.34
VPS8-227ENST00000625842 ERMNQ8TAM6 284 aa12.96□□□□□ -0.34
VPS8-227ENST00000625842 TSG101Q99816 390 aa12.96□□□□□ -0.34
VPS8-227ENST00000625842 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
VPS8-227ENST00000625842 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.34
VPS8-227ENST00000625842 CKAP2LQ8IYA6 745 aa12.96□□□□□ -0.34
VPS8-227ENST00000625842 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
VPS8-227ENST00000625842 FOSBP53539 338 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 STK11IPQ8N1F8 1099 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 CCP110O43303 1012 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 KAT14Q9H8E8 782 aa12.95□□□□□ -0.34
VPS8-227ENST00000625842 NSFL1CQ9UNZ2 370 aaKnown RBP12.95□□□□□ -0.34
VPS8-227ENST00000625842 RBM19Q9Y4C8 960 aaKnown RBP12.95□□□□□ -0.34
VPS8-227ENST00000625842 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
VPS8-227ENST00000625842 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 QTRT2Q9H974 415 aaKnown RBP12.94□□□□□ -0.34
VPS8-227ENST00000625842 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 EAPPQ56P03 285 aaPredicted RBP12.94□□□□□ -0.34
VPS8-227ENST00000625842 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 DEF6Q9H4E7 631 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 ANAPC15P60006 121 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
VPS8-227ENST00000625842 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
VPS8-227ENST00000625842 CSADQ9Y600 493 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 TTC6Q86TZ1 520 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 C22orf23Q9BZE7 217 aa12.93□□□□□ -0.34
VPS8-227ENST00000625842 RIMS2Q9UQ26 1411 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms