RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
ATRX-216ENST00000624403 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 STK25O00506 426 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
ATRX-216ENST00000624403 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
ATRX-216ENST00000624403 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
ATRX-216ENST00000624403 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
ATRX-216ENST00000624403 PHKG2P15735 406 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 EVA1CP58658 441 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 TEFQ10587 303 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 BOLA1Q9Y3E2 137 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 AAMPQ13685 434 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
ATRX-216ENST00000624403 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 CYP27B1O15528 508 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
ATRX-216ENST00000624403 KCNQ3O43525 872 aa13.14□□□□□ -0.31
ATRX-216ENST00000624403 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
ATRX-216ENST00000624403 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
ATRX-216ENST00000624403 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
ATRX-216ENST00000624403 ABCC4O15439 1325 aa13.13□□□□□ -0.31
ATRX-216ENST00000624403 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
ATRX-216ENST00000624403 IL2RBP14784 551 aa13.13□□□□□ -0.31
ATRX-216ENST00000624403 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
ATRX-216ENST00000624403 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
ATRX-216ENST00000624403 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
ATRX-216ENST00000624403 G3V3G9 751 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 IGHDP01880 384 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 G2E3Q7L622 706 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 RGS12O14924 1447 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PTPRCP08575 1304 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 MRC1P22897 1456 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 SCN11AQ9UI33 1791 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 HOXB7P09629 217 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 CABP4P57796 275 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 FLIIQ13045 1269 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
ATRX-216ENST00000624403 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
ATRX-216ENST00000624403 JCADQ9P266 1359 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
ATRX-216ENST00000624403 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms