RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
PCDHB2-202ENST00000622947 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
PCDHB2-202ENST00000622947 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
PCDHB2-202ENST00000622947 SEC24BO95487 1268 aa23.08■■□□□ 1.29
PCDHB2-202ENST00000622947 PIP4K2BP78356 416 aa23.08■■□□□ 1.28
PCDHB2-202ENST00000622947 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.28
PCDHB2-202ENST00000622947 USP16Q9Y5T5 823 aa23.07■■□□□ 1.28
PCDHB2-202ENST00000622947 TOGARAM1Q9Y4F4 1720 aa23.07■■□□□ 1.28
PCDHB2-202ENST00000622947 BEND3Q5T5X7 828 aa23.06■■□□□ 1.28
PCDHB2-202ENST00000622947 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
PCDHB2-202ENST00000622947 GNAI2P04899 355 aa23.05■■□□□ 1.28
PCDHB2-202ENST00000622947 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
PCDHB2-202ENST00000622947 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 EIF5BO60841 1220 aaKnown RBP23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 SRCIN1Q9C0H9 1055 aa23.04■■□□□ 1.28
PCDHB2-202ENST00000622947 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
PCDHB2-202ENST00000622947 GNAI3P08754 354 aa23.03■■□□□ 1.28
PCDHB2-202ENST00000622947 HYPKQ9NX55 129 aa23.03■■□□□ 1.28
PCDHB2-202ENST00000622947 UBR2Q8IWV8 1755 aa23.03■■□□□ 1.28
PCDHB2-202ENST00000622947 SNRPA1P09661 255 aaKnown RBP23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 LRP10Q7Z4F1 713 aa23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 MAP3K2Q9Y2U5 619 aa23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 LRRFIP2Q9Y608 721 aaKnown RBP23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 PNMA6EA0A0J9YXQ4 647 aa23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 BRPF3Q9ULD4 1205 aa23.02■■□□□ 1.28
PCDHB2-202ENST00000622947 PAPPAQ13219 1627 aa23.02■■□□□ 1.27
PCDHB2-202ENST00000622947 TOM1O60784 492 aa23.01■■□□□ 1.27
PCDHB2-202ENST00000622947 NBPF7P0C2Y1 421 aaPredicted RBP23.01■■□□□ 1.27
PCDHB2-202ENST00000622947 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
PCDHB2-202ENST00000622947 MYL6BP14649 208 aa23■■□□□ 1.27
PCDHB2-202ENST00000622947 AIMP1Q12904 312 aaKnown RBP23■■□□□ 1.27
PCDHB2-202ENST00000622947 KCPQ6ZWJ8 1503 aa23■■□□□ 1.27
PCDHB2-202ENST00000622947 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
PCDHB2-202ENST00000622947 NRAPQ86VF7 1730 aa22.99■■□□□ 1.27
PCDHB2-202ENST00000622947 UBTFL1P0CB47 393 aaPredicted RBP22.98■■□□□ 1.27
PCDHB2-202ENST00000622947 ATP8B2P98198 1209 aa22.98■■□□□ 1.27
PCDHB2-202ENST00000622947 LAMB4A4D0S4 1761 aa22.98■■□□□ 1.27
PCDHB2-202ENST00000622947 SMARCA5O60264 1052 aaPredicted RBP22.98■■□□□ 1.27
PCDHB2-202ENST00000622947 APBB1O00213 710 aa22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 GSE1Q14687 1217 aa22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 CWF19L2Q2TBE0 894 aaKnown RBP22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 OTUD7AQ8TE49 926 aaPredicted RBP22.97■■□□□ 1.27
PCDHB2-202ENST00000622947 XAGE3Q8WTP9 111 aa22.96■■□□□ 1.27
PCDHB2-202ENST00000622947 ITGB4P16144 1822 aa22.96■■□□□ 1.27
PCDHB2-202ENST00000622947 HMMRO75330 724 aa22.96■■□□□ 1.27
PCDHB2-202ENST00000622947 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
PCDHB2-202ENST00000622947 PLEKHM2Q8IWE5 1019 aa22.95■■□□□ 1.26
PCDHB2-202ENST00000622947 TNS2Q63HR2 1409 aa22.95■■□□□ 1.26
PCDHB2-202ENST00000622947 UBAP1LF5GYI3 381 aa22.94■■□□□ 1.26
PCDHB2-202ENST00000622947 EXOC6BQ9Y2D4 811 aa22.94■■□□□ 1.26
PCDHB2-202ENST00000622947 PTCD1O75127 700 aaKnown RBP22.94■■□□□ 1.26
PCDHB2-202ENST00000622947 PKNOX2Q96KN3 472 aa22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 KAT6BQ8WYB5 2073 aa22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
PCDHB2-202ENST00000622947 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
PCDHB2-202ENST00000622947 BMP2KLQ5H9B9 411 aa22.92■■□□□ 1.26
PCDHB2-202ENST00000622947 PIGBQ92521 554 aa22.92■■□□□ 1.26
PCDHB2-202ENST00000622947 ALDH1L1O75891 902 aa22.92■■□□□ 1.26
PCDHB2-202ENST00000622947 SSH3Q8TE77 659 aa22.92■■□□□ 1.26
PCDHB2-202ENST00000622947 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 PPP1R42Q7Z4L9 355 aa22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 LINS1Q8NG48 757 aa22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 ASAP1Q9ULH1 1129 aa22.91■■□□□ 1.26
PCDHB2-202ENST00000622947 RIC3Q7Z5B4 369 aa22.9■■□□□ 1.26
PCDHB2-202ENST00000622947 GSPT1P15170 499 aaKnown RBP22.9■■□□□ 1.26
PCDHB2-202ENST00000622947 POLA2Q14181 598 aa22.89■■□□□ 1.26
PCDHB2-202ENST00000622947 A1BGP04217 495 aa22.89■■□□□ 1.25
PCDHB2-202ENST00000622947 ANKRD13DQ6ZTN6 518 aa22.89■■□□□ 1.25
PCDHB2-202ENST00000622947 SLIT2O94813 1529 aa22.89■■□□□ 1.25
PCDHB2-202ENST00000622947 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.25
PCDHB2-202ENST00000622947 EXOC5O00471 708 aa22.88■■□□□ 1.25
PCDHB2-202ENST00000622947 IBTKQ9P2D0 1353 aaPredicted RBP22.88■■□□□ 1.25
PCDHB2-202ENST00000622947 KAZALD1Q96I82 304 aa22.88■■□□□ 1.25
PCDHB2-202ENST00000622947 METTL22Q9BUU2 404 aaPredicted RBP22.87■■□□□ 1.25
PCDHB2-202ENST00000622947 ATG3Q9NT62 314 aa22.87■■□□□ 1.25
PCDHB2-202ENST00000622947 C9orf78Q9NZ63 289 aaPredicted RBP22.87■■□□□ 1.25
PCDHB2-202ENST00000622947 NWD2Q9ULI1 1742 aa22.87■■□□□ 1.25
PCDHB2-202ENST00000622947 UTYO14607 1347 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 NEURL1BA8MQ27 555 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 GRM8O00222 908 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 SRGAP3O43295 1099 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 DDRGK1Q96HY6 314 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 MYD88Q99836 296 aa22.86■■□□□ 1.25
PCDHB2-202ENST00000622947 SPATA31A5Q5VU36 1347 aa22.85■■□□□ 1.25
PCDHB2-202ENST00000622947 SPATA31A7Q8IWB4 1347 aa22.85■■□□□ 1.25
PCDHB2-202ENST00000622947 BCL9O00512 1426 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms