RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 SLC26A8Q96RN1 970 aa21.79■■□□□ 1.08
GTF2IP1-210ENST00000622829 ABCC4O15439 1325 aa21.79■■□□□ 1.08
GTF2IP1-210ENST00000622829 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
GTF2IP1-210ENST00000622829 PRDM4Q9UKN5 801 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 ARID5BQ14865 1188 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 RUFY2Q8WXA3 655 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 USP16Q9Y5T5 823 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 ME1P48163 572 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 CCT2P78371 535 aaKnown RBP21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 TYRO3Q06418 890 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 PTPN21Q16825 1174 aa21.78■■□□□ 1.08
GTF2IP1-210ENST00000622829 DUOX2Q9NRD8 1548 aa21.77■■□□□ 1.08
GTF2IP1-210ENST00000622829 GTF3C6Q969F1 213 aa21.77■■□□□ 1.08
GTF2IP1-210ENST00000622829 IL13P35225 146 aa21.76■■□□□ 1.07
GTF2IP1-210ENST00000622829 ZNF710Q8N1W2 664 aa21.76■■□□□ 1.07
GTF2IP1-210ENST00000622829 GPATCH3Q96I76 525 aa21.76■■□□□ 1.07
GTF2IP1-210ENST00000622829 ADCK5Q3MIX3 580 aa21.76■■□□□ 1.07
GTF2IP1-210ENST00000622829 GTF2F1P35269 517 aaKnown RBP eCLIP21.76■■□□□ 1.07
GTF2IP1-210ENST00000622829 CYP2E1P05181 493 aaPredicted RBP21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 PTPN14Q15678 1187 aa21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 BLOC1S2Q6QNY1 142 aa21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 ZSWIM4Q9H7M6 989 aa21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 SNX14Q9Y5W7 946 aa21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 LETM1O95202 739 aaPredicted RBP21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 RHPN1Q8TCX5 695 aa21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 MTHFSDQ2M296 383 aaKnown RBP21.75■■□□□ 1.07
GTF2IP1-210ENST00000622829 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 CDC37L1Q7L3B6 337 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 NEUROD6Q96NK8 337 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 G3BP1Q13283 466 aaKnown RBP eCLIP21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 CCDC73Q6ZRK6 1079 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 PDILTQ8N807 584 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 EDC3Q96F86 508 aaKnown RBP21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 PIP4K2AP48426 406 aaPredicted RBP21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 CHST3Q7LGC8 479 aa21.74■■□□□ 1.07
GTF2IP1-210ENST00000622829 NRDCO43847 1150 aa21.73■■□□□ 1.07
GTF2IP1-210ENST00000622829 ATP2B1P20020 1258 aa21.73■■□□□ 1.07
GTF2IP1-210ENST00000622829 KLHDC4Q8TBB5 520 aa21.73■■□□□ 1.07
GTF2IP1-210ENST00000622829 RUFY3Q7L099 469 aa21.73■■□□□ 1.07
GTF2IP1-210ENST00000622829 PLCH2O75038 1416 aa21.72■■□□□ 1.07
GTF2IP1-210ENST00000622829 CEP135Q66GS9 1140 aa21.72■■□□□ 1.07
GTF2IP1-210ENST00000622829 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
GTF2IP1-210ENST00000622829 PTH1RQ03431 593 aa21.72■■□□□ 1.07
GTF2IP1-210ENST00000622829 DMTNQ08495 405 aa21.72■■□□□ 1.07
GTF2IP1-210ENST00000622829 KINO60870 393 aaKnown RBP21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 NBPF7P0C2Y1 421 aaPredicted RBP21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 SKILP12757 684 aa21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 FAM200AQ8TCP9 573 aa21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 FAM227BQ96M60 508 aa21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 MYL6BP14649 208 aa21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 MNS1Q8NEH6 495 aa21.71■■□□□ 1.07
GTF2IP1-210ENST00000622829 ZSCAN20P17040 1043 aaPredicted RBP21.7■■□□□ 1.07
GTF2IP1-210ENST00000622829 TERF1P54274 439 aa21.7■■□□□ 1.06
GTF2IP1-210ENST00000622829 CBX8Q9HC52 389 aa21.7■■□□□ 1.06
GTF2IP1-210ENST00000622829 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.06
GTF2IP1-210ENST00000622829 ELF2Q15723 593 aa21.7■■□□□ 1.06
GTF2IP1-210ENST00000622829 LARP1Q6PKG0 1096 aaKnown RBP21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 TTC6Q86TZ1 520 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 ABCA8O94911 1581 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 E9PCH4 1651 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 JAK2O60674 1132 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 ST7Q9NRC1 585 aa21.69■■□□□ 1.06
GTF2IP1-210ENST00000622829 UVSSAQ2YD98 709 aa21.68■■□□□ 1.06
GTF2IP1-210ENST00000622829 RBM8AQ9Y5S9 174 aaKnown RBP21.68■■□□□ 1.06
GTF2IP1-210ENST00000622829 MAST1Q9Y2H9 1570 aa21.68■■□□□ 1.06
GTF2IP1-210ENST00000622829 FTOQ9C0B1 505 aaKnown RBP eCLIP21.68■■□□□ 1.06
GTF2IP1-210ENST00000622829 NCOA3Q9Y6Q9 1424 aa21.68■■□□□ 1.06
GTF2IP1-210ENST00000622829 AP5Z1O43299 807 aa21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 ME3Q16798 604 aa21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 KIF1BPQ96EK5 621 aa21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 CCDC85AQ96PX6 553 aaPredicted RBP21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 POLR3DP05423 398 aaPredicted RBP21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 ZNF215Q9UL58 517 aaPredicted RBP21.67■■□□□ 1.06
GTF2IP1-210ENST00000622829 FANCAO15360 1455 aa21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 CWF19L2Q2TBE0 894 aaKnown RBP21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 KIAA1524Q8TCG1 905 aa21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 HTATSF1O43719 755 aaKnown RBP21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 INTS4Q96HW7 963 aaKnown RBP21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 KCNF1Q9H3M0 494 aa21.66■■□□□ 1.06
GTF2IP1-210ENST00000622829 WASLO00401 505 aaPredicted RBP21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 NR1I2O75469 434 aa21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 URI1O94763 535 aaPredicted RBP21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 ZMYM3Q14202 1370 aa21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 NSD2O96028 1365 aa21.65■■□□□ 1.06
GTF2IP1-210ENST00000622829 CHPF2Q9P2E5 772 aa21.64■■□□□ 1.06
GTF2IP1-210ENST00000622829 PTPRCP08575 1304 aa21.64■■□□□ 1.05
GTF2IP1-210ENST00000622829 IBTKQ9P2D0 1353 aaPredicted RBP21.64■■□□□ 1.05
GTF2IP1-210ENST00000622829 RIMS2Q9UQ26 1411 aa21.64■■□□□ 1.05
GTF2IP1-210ENST00000622829 OTUD7BQ6GQQ9 843 aa21.64■■□□□ 1.05
GTF2IP1-210ENST00000622829 CCDC129Q6ZRS4 1044 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 TMC6Q7Z403 805 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 BRF1Q92994 677 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms