RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 HMGN5P82970 282 aaKnown RBP15.03■□□□□ -0
LITAF-221ENST00000622633 HMMRO75330 724 aa15.03■□□□□ -0
LITAF-221ENST00000622633 PTMSP20962 102 aa15.03■□□□□ -0
LITAF-221ENST00000622633 EYA1Q99502 592 aa15.03■□□□□ -0
LITAF-221ENST00000622633 BCL2L12Q9HB09 334 aa15.03■□□□□ -0
LITAF-221ENST00000622633 AMPHP49418 695 aa15.02■□□□□ -0
LITAF-221ENST00000622633 EP400NLQ6ZTU2 488 aa15.02■□□□□ -0
LITAF-221ENST00000622633 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
LITAF-221ENST00000622633 ARHGEF10O15013 1369 aa15.02□□□□□ -0.01
LITAF-221ENST00000622633 IBTKQ9P2D0 1353 aaPredicted RBP15.02□□□□□ -0.01
LITAF-221ENST00000622633 CEBPAP49715 358 aaPredicted RBP15.02□□□□□ -0.01
LITAF-221ENST00000622633 CCT4P50991 539 aaKnown RBP15.02□□□□□ -0.01
LITAF-221ENST00000622633 NGDNQ8NEJ9 315 aaKnown RBP15.02□□□□□ -0.01
LITAF-221ENST00000622633 NECTIN2Q92692 538 aa15.02□□□□□ -0.01
LITAF-221ENST00000622633 GOLGA6L22H0YM25 854 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 PTMAP06454 111 aaKnown RBP15.01□□□□□ -0.01
LITAF-221ENST00000622633 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 TSPYL1Q9H0U9 437 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 EFCC1Q9HA90 598 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 PDE1AP54750 535 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 TSHZ3Q63HK5 1081 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 EXOC6BQ9Y2D4 811 aa15.01□□□□□ -0.01
LITAF-221ENST00000622633 PKP1Q13835 747 aa15□□□□□ -0.01
LITAF-221ENST00000622633 FEZ1Q99689 392 aa15□□□□□ -0.01
LITAF-221ENST00000622633 PLEKHG1Q9ULL1 1385 aa15□□□□□ -0.01
LITAF-221ENST00000622633 ERC2O15083 957 aa15□□□□□ -0.01
LITAF-221ENST00000622633 REC8O95072 547 aa15□□□□□ -0.01
LITAF-221ENST00000622633 GNAI2P04899 355 aa15□□□□□ -0.01
LITAF-221ENST00000622633 OGFRQ9NZT2 677 aa15□□□□□ -0.01
LITAF-221ENST00000622633 FEZ2Q9UHY8 353 aaPredicted RBP15□□□□□ -0.01
LITAF-221ENST00000622633 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
LITAF-221ENST00000622633 MCTP1Q6DN14 999 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 STK31Q9BXU1 1019 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 ST18O60284 1047 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 NUCB2P80303 420 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 ZGPATQ8N5A5 531 aaKnown RBP14.99□□□□□ -0.01
LITAF-221ENST00000622633 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 SBNO1A3KN83 1393 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 FLT4P35916 1363 aa14.99□□□□□ -0.01
LITAF-221ENST00000622633 UBR1Q8IWV7 1749 aa14.98□□□□□ -0.01
LITAF-221ENST00000622633 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
LITAF-221ENST00000622633 CALCOCO1Q9P1Z2 691 aa14.98□□□□□ -0.01
LITAF-221ENST00000622633 OSBPL3Q9H4L5 887 aa14.98□□□□□ -0.01
LITAF-221ENST00000622633 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
LITAF-221ENST00000622633 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 CYP2E1P05181 493 aaPredicted RBP14.97□□□□□ -0.01
LITAF-221ENST00000622633 FLIIQ13045 1269 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 FKBP5Q13451 457 aaPredicted RBP14.97□□□□□ -0.01
LITAF-221ENST00000622633 ANKRD7Q92527 254 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
LITAF-221ENST00000622633 KDRP35968 1356 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 PNMA6EA0A0J9YXQ4 647 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 NLRP6P59044 892 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 KLHL40Q2TBA0 621 aa14.97□□□□□ -0.01
LITAF-221ENST00000622633 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.01
LITAF-221ENST00000622633 FAM43BQ6ZT52 329 aaPredicted RBP14.96□□□□□ -0.01
LITAF-221ENST00000622633 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
LITAF-221ENST00000622633 CCDC39Q9UFE4 941 aa14.96□□□□□ -0.01
LITAF-221ENST00000622633 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.02
LITAF-221ENST00000622633 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 RBSNQ9H1K0 784 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 AK9Q5TCS8 1911 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 TERF2Q15554 542 aa14.95□□□□□ -0.02
LITAF-221ENST00000622633 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
LITAF-221ENST00000622633 ZNF445P59923 1031 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 EGFL6Q8IUX8 553 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 IL17REQ8NFR9 667 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 ZDHHC9Q9Y397 364 aa14.94□□□□□ -0.02
LITAF-221ENST00000622633 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
LITAF-221ENST00000622633 GNAI3P08754 354 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 NEK4P51957 841 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 BANK1Q8NDB2 785 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 CHAMP1Q96JM3 812 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
LITAF-221ENST00000622633 MX1P20591 662 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 NOP2P46087 812 aaKnown RBP14.93□□□□□ -0.02
LITAF-221ENST00000622633 RILPL2Q969X0 211 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 TRERF1Q96PN7 1200 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 ESYT1Q9BSJ8 1104 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 SALL3Q9BXA9 1300 aa14.93□□□□□ -0.02
LITAF-221ENST00000622633 HOXC9P31274 260 aa14.92□□□□□ -0.02
LITAF-221ENST00000622633 CT47A1Q5JQC4 288 aaPredicted RBP14.92□□□□□ -0.02
LITAF-221ENST00000622633 CAVIN1Q6NZI2 390 aaKnown RBP14.92□□□□□ -0.02
LITAF-221ENST00000622633 PRPF40AO75400 957 aaKnown RBP14.92□□□□□ -0.02
LITAF-221ENST00000622633 FOXD4L5Q5VV16 416 aaPredicted RBP14.92□□□□□ -0.02
LITAF-221ENST00000622633 FOXD4L4Q8WXT5 416 aaPredicted RBP14.92□□□□□ -0.02
LITAF-221ENST00000622633 PHF14O94880 888 aa14.91□□□□□ -0.02
LITAF-221ENST00000622633 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms