RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 USPL1Q5W0Q7 1092 aa27.18■■□□□ 1.94
ITM2C-210ENST00000620962 C9orf131Q5VYM1 1079 aa27.17■■□□□ 1.94
ITM2C-210ENST00000620962 NARFQ9UHQ1 456 aa27.17■■□□□ 1.94
ITM2C-210ENST00000620962 COL15A1P39059 1388 aa27.17■■□□□ 1.94
ITM2C-210ENST00000620962 SBF1O95248 1867 aa27.16■■□□□ 1.94
ITM2C-210ENST00000620962 NPC1L1Q9UHC9 1359 aa27.15■■□□□ 1.94
ITM2C-210ENST00000620962 CHRNA5P30532 468 aa27.15■■□□□ 1.94
ITM2C-210ENST00000620962 CC2D1BQ5T0F9 858 aaKnown RBP27.15■■□□□ 1.94
ITM2C-210ENST00000620962 IFFO2Q5TF58 517 aa27.15■■□□□ 1.94
ITM2C-210ENST00000620962 ZBTB1Q9Y2K1 713 aa27.15■■□□□ 1.94
ITM2C-210ENST00000620962 APLP1P51693 650 aa27.14■■□□□ 1.94
ITM2C-210ENST00000620962 NMRK2Q9NPI5 230 aa27.14■■□□□ 1.94
ITM2C-210ENST00000620962 COL3A1P02461 1466 aaPredicted RBP27.13■■□□□ 1.93
ITM2C-210ENST00000620962 DLEC1Q9Y238 1755 aa27.13■■□□□ 1.93
ITM2C-210ENST00000620962 NFIXQ14938 502 aa27.13■■□□□ 1.93
ITM2C-210ENST00000620962 BCL2L12Q9HB09 334 aa27.11■■□□□ 1.93
ITM2C-210ENST00000620962 SIPA1L3O60292 1781 aaPredicted RBP27.1■■□□□ 1.93
ITM2C-210ENST00000620962 RNF181Q9P0P0 153 aa27.1■■□□□ 1.93
ITM2C-210ENST00000620962 RBM46Q8TBY0 533 aaKnown RBP27.09■■□□□ 1.93
ITM2C-210ENST00000620962 KDM2BQ8NHM5 1336 aa27.09■■□□□ 1.93
ITM2C-210ENST00000620962 TTC5Q8N0Z6 440 aa27.08■■□□□ 1.93
ITM2C-210ENST00000620962 TNRC6CQ9HCJ0 1690 aaKnown RBP27.08■■□□□ 1.92
ITM2C-210ENST00000620962 STARD3NLO95772 234 aa27.07■■□□□ 1.92
ITM2C-210ENST00000620962 SERPINB2P05120 415 aa27.06■■□□□ 1.92
ITM2C-210ENST00000620962 EIF5P55010 431 aaKnown RBP27.06■■□□□ 1.92
ITM2C-210ENST00000620962 GAS2L2Q8NHY3 880 aa27.06■■□□□ 1.92
ITM2C-210ENST00000620962 ZC3H4Q9UPT8 1303 aaKnown RBP27.06■■□□□ 1.92
ITM2C-210ENST00000620962 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
ITM2C-210ENST00000620962 WDR90Q96KV7 1748 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 A0A087WZG4 1122 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 GNAT3A8MTJ3 354 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 TEFQ10587 303 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 ZNF790Q6PG37 636 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 C16orf71Q8IYS4 520 aaPredicted RBP27.04■■□□□ 1.92
ITM2C-210ENST00000620962 IL17REQ8NFR9 667 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 HEG1Q9ULI3 1381 aa27.04■■□□□ 1.92
ITM2C-210ENST00000620962 U2SURPO15042 1029 aaKnown RBP27.03■■□□□ 1.92
ITM2C-210ENST00000620962 SCN7AQ01118 1682 aa27.03■■□□□ 1.92
ITM2C-210ENST00000620962 FSTL1Q12841 308 aa27.03■■□□□ 1.92
ITM2C-210ENST00000620962 DNAJC5GQ8N7S2 189 aa27.03■■□□□ 1.92
ITM2C-210ENST00000620962 TEX13AQ9BXU3 409 aaPredicted RBP27.03■■□□□ 1.92
ITM2C-210ENST00000620962 ZNF496Q96IT1 587 aaPredicted RBP27.02■■□□□ 1.92
ITM2C-210ENST00000620962 TTLL6Q8N841 843 aa27.01■■□□□ 1.91
ITM2C-210ENST00000620962 CEMIPQ8WUJ3 1361 aa27■■□□□ 1.91
ITM2C-210ENST00000620962 CARMIL3Q8ND23 1372 aa26.99■■□□□ 1.91
ITM2C-210ENST00000620962 RASSF7Q02833 373 aa26.99■■□□□ 1.91
ITM2C-210ENST00000620962 C2CD5Q86YS7 1000 aa26.99■■□□□ 1.91
ITM2C-210ENST00000620962 ANKRD31Q8N7Z5 1873 aa26.99■■□□□ 1.91
ITM2C-210ENST00000620962 CCDC88AQ3V6T2 1871 aa26.98■■□□□ 1.91
ITM2C-210ENST00000620962 H0YIN7 160 aa26.98■■□□□ 1.91
ITM2C-210ENST00000620962 LMNB1P20700 586 aa26.98■■□□□ 1.91
ITM2C-210ENST00000620962 RRAGCQ9HB90 399 aa26.98■■□□□ 1.91
ITM2C-210ENST00000620962 IL6STP40189 918 aaPredicted RBP26.97■■□□□ 1.91
ITM2C-210ENST00000620962 FMNL2Q96PY5 1086 aa26.97■■□□□ 1.91
ITM2C-210ENST00000620962 PDZRN3Q9UPQ7 1066 aa26.97■■□□□ 1.91
ITM2C-210ENST00000620962 TBC1D9BQ66K14 1250 aa26.96■■□□□ 1.91
ITM2C-210ENST00000620962 BICDL1Q6ZP65 573 aa26.96■■□□□ 1.91
ITM2C-210ENST00000620962 TIAM2Q8IVF5 1701 aa26.96■■□□□ 1.91
ITM2C-210ENST00000620962 PRELPP51888 382 aa26.94■■□□□ 1.9
ITM2C-210ENST00000620962 CNGB1Q14028 1251 aaPredicted RBP26.94■■□□□ 1.9
ITM2C-210ENST00000620962 CFAP53Q96M91 514 aa26.93■■□□□ 1.9
ITM2C-210ENST00000620962 BRIP1Q9BX63 1249 aa26.93■■□□□ 1.9
ITM2C-210ENST00000620962 RSPH6AQ9H0K4 717 aa26.93■■□□□ 1.9
ITM2C-210ENST00000620962 BCORQ6W2J9 1755 aa26.93■■□□□ 1.9
ITM2C-210ENST00000620962 COL11A2P13942 1736 aaPredicted RBP26.93■■□□□ 1.9
ITM2C-210ENST00000620962 GLTPD2A6NH11 291 aa26.92■■□□□ 1.9
ITM2C-210ENST00000620962 PDE6BP35913 854 aa26.92■■□□□ 1.9
ITM2C-210ENST00000620962 PHACTR3Q96KR7 559 aa26.92■■□□□ 1.9
ITM2C-210ENST00000620962 TBC1D2BQ9UPU7 963 aa26.92■■□□□ 1.9
ITM2C-210ENST00000620962 NFKBIEO00221 500 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 A1BGP04217 495 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 PRKAR2BP31323 418 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 PRR5LQ6MZQ0 368 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 SMC1BQ8NDV3 1235 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 FER1L6Q2WGJ9 1857 aa26.91■■□□□ 1.9
ITM2C-210ENST00000620962 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
ITM2C-210ENST00000620962 KLRG1Q96E93 195 aa26.9■■□□□ 1.9
ITM2C-210ENST00000620962 ZNF330Q9Y3S2 320 aaPredicted RBP26.9■■□□□ 1.9
ITM2C-210ENST00000620962 DICER1Q9UPY3 1922 aaKnown RBP26.9■■□□□ 1.9
ITM2C-210ENST00000620962 CAMTA2O94983 1202 aa26.89■■□□□ 1.9
ITM2C-210ENST00000620962 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.9
ITM2C-210ENST00000620962 VEGFAP15692 232 aaPredicted RBP26.88■■□□□ 1.89
ITM2C-210ENST00000620962 NUDCQ9Y266 331 aa26.88■■□□□ 1.89
ITM2C-210ENST00000620962 KCNQ3O43525 872 aa26.87■■□□□ 1.89
ITM2C-210ENST00000620962 ZNF622Q969S3 477 aaKnown RBP eCLIP26.87■■□□□ 1.89
ITM2C-210ENST00000620962 SETDB2Q96T68 719 aa26.87■■□□□ 1.89
ITM2C-210ENST00000620962 HTRA3P83110 453 aa26.86■■□□□ 1.89
ITM2C-210ENST00000620962 JMYQ8N9B5 988 aa26.86■■□□□ 1.89
ITM2C-210ENST00000620962 ARFGEF2Q9Y6D5 1785 aa26.86■■□□□ 1.89
ITM2C-210ENST00000620962 CNBD1Q8NA66 436 aa26.85■■□□□ 1.89
ITM2C-210ENST00000620962 DZIP3Q86Y13 1208 aaKnown RBP26.84■■□□□ 1.89
ITM2C-210ENST00000620962 USP16Q9Y5T5 823 aa26.84■■□□□ 1.89
ITM2C-210ENST00000620962 C21orf2O43822 256 aa26.83■■□□□ 1.89
ITM2C-210ENST00000620962 ST5P78524 1137 aa26.83■■□□□ 1.89
ITM2C-210ENST00000620962 CCDC24Q8N4L8 307 aa26.83■■□□□ 1.89
ITM2C-210ENST00000620962 LTBP3Q9NS15 1303 aa26.83■■□□□ 1.89
ITM2C-210ENST00000620962 CACNA1SQ13698 1873 aa26.83■■□□□ 1.88
ITM2C-210ENST00000620962 SLX4Q8IY92 1834 aa26.82■■□□□ 1.88
ITM2C-210ENST00000620962 STYK1Q6J9G0 422 aa26.82■■□□□ 1.88
ITM2C-210ENST00000620962 CLEC4GQ6UXB4 293 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms