RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
VPS11-207ENST00000620429 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
VPS11-207ENST00000620429 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
VPS11-207ENST00000620429 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
VPS11-207ENST00000620429 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.43□□□□□ -0.42
VPS11-207ENST00000620429 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
VPS11-207ENST00000620429 PHF14O94880 888 aa12.43□□□□□ -0.42
VPS11-207ENST00000620429 ADCY5O95622 1261 aa12.43□□□□□ -0.42
VPS11-207ENST00000620429 CASQ1P31415 396 aa12.43□□□□□ -0.42
VPS11-207ENST00000620429 CT47A1Q5JQC4 288 aaPredicted RBP12.43□□□□□ -0.42
VPS11-207ENST00000620429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS11-207ENST00000620429 SYAP1Q96A49 352 aaPredicted RBP12.43□□□□□ -0.42
VPS11-207ENST00000620429 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
VPS11-207ENST00000620429 NRXN3Q9Y4C0 1643 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
VPS11-207ENST00000620429 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
VPS11-207ENST00000620429 LTKP29376 864 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
VPS11-207ENST00000620429 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
VPS11-207ENST00000620429 USP25Q9UHP3 1055 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
VPS11-207ENST00000620429 GOLGA6L6A8MZA4 724 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 PYCARDQ9ULZ3 195 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 PAXBP1Q9Y5B6 917 aa12.41□□□□□ -0.42
VPS11-207ENST00000620429 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.42
VPS11-207ENST00000620429 IL16Q14005 1332 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
VPS11-207ENST00000620429 MPNDQ8N594 471 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS11-207ENST00000620429 KCNF1Q9H3M0 494 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 MSH6P52701 1360 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
VPS11-207ENST00000620429 PKP1Q13835 747 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 KMT5BQ4FZB7 885 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
VPS11-207ENST00000620429 TMEM94Q12767 1356 aa12.4□□□□□ -0.43
VPS11-207ENST00000620429 NME9Q86XW9 330 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 ZDHHC9Q9Y397 364 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 DLC1Q96QB1 1528 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 RABEP1Q15276 862 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 DCCP43146 1447 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 JCADQ9P266 1359 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 MYO1CO00159 1063 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
VPS11-207ENST00000620429 COL16A1Q07092 1604 aaPredicted RBP12.38□□□□□ -0.43
VPS11-207ENST00000620429 SATB1Q01826 763 aa12.38□□□□□ -0.43
VPS11-207ENST00000620429 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
VPS11-207ENST00000620429 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
VPS11-207ENST00000620429 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
VPS11-207ENST00000620429 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
VPS11-207ENST00000620429 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
VPS11-207ENST00000620429 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
VPS11-207ENST00000620429 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 KDM4AO75164 1064 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 DONSONQ9NYP3 566 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 SYT10Q6XYQ8 523 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 TBX22Q9Y458 520 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 ROBO2Q9HCK4 1378 aa12.37□□□□□ -0.43
VPS11-207ENST00000620429 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
VPS11-207ENST00000620429 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
VPS11-207ENST00000620429 CDC45O75419 566 aa12.36□□□□□ -0.43
VPS11-207ENST00000620429 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
VPS11-207ENST00000620429 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
VPS11-207ENST00000620429 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
VPS11-207ENST00000620429 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
VPS11-207ENST00000620429 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
VPS11-207ENST00000620429 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
VPS11-207ENST00000620429 HMOX1P09601 288 aa12.35□□□□□ -0.43
VPS11-207ENST00000620429 C10orf67Q8IYJ2 551 aa12.35□□□□□ -0.43
VPS11-207ENST00000620429 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
VPS11-207ENST00000620429 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
VPS11-207ENST00000620429 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
VPS11-207ENST00000620429 ATP7BP35670 1465 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 GYS2P54840 703 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
VPS11-207ENST00000620429 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 RRS1Q15050 365 aaKnown RBP12.34□□□□□ -0.43
VPS11-207ENST00000620429 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 TEX35Q5T0J7 233 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
VPS11-207ENST00000620429 TRIM66O15016 1216 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 MCCP23508 829 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.44
VPS11-207ENST00000620429 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms