RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 CCAR2Q8N163 923 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 SLC5A1P13866 664 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 STK38Q15208 465 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 LGR6Q9HBX8 967 aa12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
SMARCA1-205ENST00000617310 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 IBSPP21815 317 aaPredicted RBP12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 ZHX3Q9H4I2 956 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 ABCC1P33527 1531 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 GNPATO15228 680 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 SASS6Q6UVJ0 657 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 RAB11FIP4Q86YS3 637 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
SMARCA1-205ENST00000617310 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 CTNNA3Q9UI47 895 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 NFKBIBQ15653 356 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 PDCP20941 246 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 GLIPR1L2Q4G1C9 344 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 SSBP05455 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 RTCBQ9Y3I0 505 aaKnown RBP12.03□□□□□ -0.48
SMARCA1-205ENST00000617310 PTPRCP08575 1304 aa12.02□□□□□ -0.48
SMARCA1-205ENST00000617310 IGHDP01880 384 aa12.02□□□□□ -0.48
SMARCA1-205ENST00000617310 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.48
SMARCA1-205ENST00000617310 DCAF5Q96JK2 942 aa12.02□□□□□ -0.48
SMARCA1-205ENST00000617310 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.48
SMARCA1-205ENST00000617310 GRM8O00222 908 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 A1BGP04217 495 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 GRM1Q13255 1194 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 TRMT1LQ7Z2T5 733 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 MPNDQ8N594 471 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
SMARCA1-205ENST00000617310 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 ME1P48163 572 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 TPM1P09493 284 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 G2E3Q7L622 706 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 ZNF592Q92610 1267 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 TPM2P07951 284 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 GSE1Q14687 1217 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 TCEANC2Q96MN5 208 aa12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 HOOK1Q9UJC3 728 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-205ENST00000617310 KINO60870 393 aaKnown RBP12□□□□□ -0.49
SMARCA1-205ENST00000617310 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
SMARCA1-205ENST00000617310 KSR2Q6VAB6 950 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 ANKRD20A12PQ8NF67 263 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 USP21Q9UK80 565 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
SMARCA1-205ENST00000617310 RLBP1P12271 317 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 VAMP4O75379 141 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 MCM2P49736 904 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
SMARCA1-205ENST00000617310 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
SMARCA1-205ENST00000617310 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
SMARCA1-205ENST00000617310 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 CCDC152Q4G0S7 254 aa11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 CCDC144CPQ8IYA2 1237 aa11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 R3HCC1Q9Y3T6 440 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 ST5P78524 1137 aa11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 DNAJC10Q8IXB1 793 aa11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-205ENST00000617310 K7ELQ4 463 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms