RNA–Protein interactions for RNA: ENST00000615680.4

DCLK1-208, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 7,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-208ENST00000615680 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 ZC3H12CQ9C0D7 883 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 PHAXQ9H814 394 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 GLRX3O76003 335 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 KIF20AO95235 890 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 CCDC39Q9UFE4 941 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 WDR7Q9Y4E6 1490 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 BCAR3O75815 825 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 MCM10Q7L590 875 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 ZNF804AQ7Z570 1209 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 NME9Q86XW9 330 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 ZSCAN31Q96LW9 406 aaPredicted RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 CFAP45Q9UL16 551 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 LRRFIP2Q9Y608 721 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 CWC27Q6UX04 472 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 TSG101Q99816 390 aa8.12□□□□□ -1.11
DCLK1-208ENST00000615680 CRNKL1Q9BZJ0 848 aaKnown RBP8.12□□□□□ -1.11
DCLK1-208ENST00000615680 SERPINC1P01008 464 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 DEKP35659 375 aaKnown RBP8.11□□□□□ -1.11
DCLK1-208ENST00000615680 STXBP4Q6ZWJ1 553 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 MBD3O95983 291 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 TMPOP42166 694 aaKnown RBP8.11□□□□□ -1.11
DCLK1-208ENST00000615680 ANAPC15P60006 121 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 NCBP1Q09161 790 aaKnown RBP8.11□□□□□ -1.11
DCLK1-208ENST00000615680 FERMT2Q96AC1 680 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 MIS18AQ9NYP9 233 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 SAMM50Q9Y512 469 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 C11orf95C9JLR9 678 aaPredicted RBP8.11□□□□□ -1.11
DCLK1-208ENST00000615680 IL2RBP14784 551 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 HSPA2P54652 639 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 DNAAF4Q8WXU2 420 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 CAMSAP2Q08AD1 1489 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 ZNF213O14771 459 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 KRT85P78386 507 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 CCDC178Q5BJE1 867 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 UHRF1BP1Q6BDS2 1440 aa8.11□□□□□ -1.11
DCLK1-208ENST00000615680 FGFR1OPO95684 399 aaKnown RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 LARP1BQ659C4 914 aaKnown RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 IL1RAPL2Q9NP60 686 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 PDRG1Q9NUG6 133 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 ANKRD62A6NC57 917 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 EZRP15311 586 aaKnown RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 RFX1P22670 979 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 CETN1Q12798 172 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 TRIM5Q9C035 493 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 VEZTQ9HBM0 779 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 HMGB1P09429 215 aaKnown RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 LRSAM1Q6UWE0 723 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 JAKMIP1Q96N16 626 aaKnown RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 JAKMIP3Q5VZ66 844 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 KAT14Q9H8E8 782 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 CKAP2LQ8IYA6 745 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
DCLK1-208ENST00000615680 WDR70Q9NW82 654 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 ABCC11Q96J66 1382 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 ACEP12821 1306 aa8.1□□□□□ -1.11
DCLK1-208ENST00000615680 EIF6P56537 245 aaKnown RBP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 CBFA2T2O43439 604 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 EPB41L2O43491 1005 aaKnown RBP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 RBM26Q5T8P6 1007 aaKnown RBP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 GPR162Q16538 588 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 WDR33Q9C0J8 1336 aaKnown RBP8.09□□□□□ -1.11
DCLK1-208ENST00000615680 NCKAP5LQ9HCH0 1330 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 FIBPO43427 364 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 LIG1P18858 919 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 PLS1Q14651 629 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 ASXL2Q76L83 1435 aa8.09□□□□□ -1.11
DCLK1-208ENST00000615680 PABPN1LA6NDY0 278 aaKnown RBP8.09□□□□□ -1.12
DCLK1-208ENST00000615680 VPS36Q86VN1 386 aa8.09□□□□□ -1.12
DCLK1-208ENST00000615680 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.12
DCLK1-208ENST00000615680 NLRP5P59047 1200 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 DHX29Q7Z478 1369 aaKnown RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 NCOA1Q15788 1441 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 PLCG2P16885 1265 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 ARAP1Q96P48 1450 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 GOLGA6L10A6NI86 522 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 IFIT3O14879 490 aaKnown RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 BOLA2Q9H3K6 86 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 KIF4AO95239 1232 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 BRDTQ58F21 947 aaPredicted RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 RBM17Q96I25 401 aaKnown RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 FERMT1Q9BQL6 677 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 EIF5P55010 431 aaKnown RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 HSP90AA2PQ14568 343 aaPredicted RBP8.08□□□□□ -1.12
DCLK1-208ENST00000615680 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
DCLK1-208ENST00000615680 TIAM1Q13009 1591 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms