RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ZNF496Q96IT1 587 aaPredicted RBP30.29■■■□□ 2.44
FAM228B-208ENST00000613899 TEX13AQ9BXU3 409 aaPredicted RBP30.27■■■□□ 2.44
FAM228B-208ENST00000613899 WWC3Q9ULE0 1092 aa30.27■■■□□ 2.44
FAM228B-208ENST00000613899 USPL1Q5W0Q7 1092 aa30.26■■■□□ 2.43
FAM228B-208ENST00000613899 FMNL2Q96PY5 1086 aa30.26■■■□□ 2.43
FAM228B-208ENST00000613899 BTBD11A6QL63 1104 aa30.25■■■□□ 2.43
FAM228B-208ENST00000613899 NEFMP07197 916 aa30.25■■■□□ 2.43
FAM228B-208ENST00000613899 NARFQ9UHQ1 456 aa30.25■■■□□ 2.43
FAM228B-208ENST00000613899 DDR1Q08345 913 aa30.24■■■□□ 2.43
FAM228B-208ENST00000613899 BRCA1P38398 1863 aaKnown RBP30.24■■■□□ 2.43
FAM228B-208ENST00000613899 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
FAM228B-208ENST00000613899 CANXP27824 592 aaKnown RBP30.22■■■□□ 2.43
FAM228B-208ENST00000613899 POLRMTO00411 1230 aaKnown RBP30.21■■■□□ 2.43
FAM228B-208ENST00000613899 MCM10Q7L590 875 aa30.21■■■□□ 2.43
FAM228B-208ENST00000613899 A0A087WZG4 1122 aa30.2■■■□□ 2.43
FAM228B-208ENST00000613899 A0A0G2JLW4 131 aa30.2■■■□□ 2.43
FAM228B-208ENST00000613899 TM4SF1P30408 202 aa30.2■■■□□ 2.43
FAM228B-208ENST00000613899 RALBP1Q15311 655 aa30.2■■■□□ 2.43
FAM228B-208ENST00000613899 SCN7AQ01118 1682 aa30.2■■■□□ 2.42
FAM228B-208ENST00000613899 DLG5Q8TDM6 1919 aa30.2■■■□□ 2.42
FAM228B-208ENST00000613899 EIF5P55010 431 aaKnown RBP30.19■■■□□ 2.42
FAM228B-208ENST00000613899 AFDNP55196 1824 aaKnown RBP30.18■■■□□ 2.42
FAM228B-208ENST00000613899 DPEP1P16444 411 aa30.18■■■□□ 2.42
FAM228B-208ENST00000613899 NRXN2Q9P2S2 1712 aa30.17■■■□□ 2.42
FAM228B-208ENST00000613899 BCS1LQ9Y276 419 aa30.17■■■□□ 2.42
FAM228B-208ENST00000613899 KCNQ3O43525 872 aa30.16■■■□□ 2.42
FAM228B-208ENST00000613899 NFIXQ14938 502 aa30.16■■■□□ 2.42
FAM228B-208ENST00000613899 PNNQ9H307 717 aaKnown RBP30.16■■■□□ 2.42
FAM228B-208ENST00000613899 ADCY9O60503 1353 aa30.15■■■□□ 2.42
FAM228B-208ENST00000613899 ARFGEF1Q9Y6D6 1849 aa30.15■■■□□ 2.42
FAM228B-208ENST00000613899 ATP10DQ9P241 1426 aa30.15■■■□□ 2.42
FAM228B-208ENST00000613899 IL6STP40189 918 aaPredicted RBP30.15■■■□□ 2.42
FAM228B-208ENST00000613899 DCTN1Q14203 1278 aa30.15■■■□□ 2.42
FAM228B-208ENST00000613899 BCL2L12Q9HB09 334 aa30.15■■■□□ 2.42
FAM228B-208ENST00000613899 NPM2Q86SE8 214 aaKnown RBP30.14■■■□□ 2.42
FAM228B-208ENST00000613899 DDX10Q13206 875 aaKnown RBP30.13■■■□□ 2.41
FAM228B-208ENST00000613899 PLEKHF1Q96S99 279 aa30.13■■■□□ 2.41
FAM228B-208ENST00000613899 ZNF330Q9Y3S2 320 aaPredicted RBP30.13■■■□□ 2.41
FAM228B-208ENST00000613899 MAPK8IP3Q9UPT6 1336 aa30.12■■■□□ 2.41
FAM228B-208ENST00000613899 GIGYF1O75420 1035 aaPredicted RBP30.11■■■□□ 2.41
FAM228B-208ENST00000613899 PIM2Q9P1W9 311 aa30.11■■■□□ 2.41
FAM228B-208ENST00000613899 SNRPA1P09661 255 aaKnown RBP30.1■■■□□ 2.41
FAM228B-208ENST00000613899 KCNA3P22001 575 aa30.1■■■□□ 2.41
FAM228B-208ENST00000613899 TAF7Q15545 349 aaPredicted RBP30.1■■■□□ 2.41
FAM228B-208ENST00000613899 BCORQ6W2J9 1755 aa30.1■■■□□ 2.41
FAM228B-208ENST00000613899 A1BGP04217 495 aa30.09■■■□□ 2.41
FAM228B-208ENST00000613899 SERPINB2P05120 415 aa30.09■■■□□ 2.41
FAM228B-208ENST00000613899 NFE2L2Q16236 605 aa30.09■■■□□ 2.41
FAM228B-208ENST00000613899 LAMB4A4D0S4 1761 aa30.08■■■□□ 2.41
FAM228B-208ENST00000613899 KDM3BQ7LBC6 1761 aa30.08■■■□□ 2.41
FAM228B-208ENST00000613899 USP16Q9Y5T5 823 aa30.08■■■□□ 2.41
FAM228B-208ENST00000613899 MYBBP1AQ9BQG0 1328 aaKnown RBP30.07■■■□□ 2.4
FAM228B-208ENST00000613899 TBC1D2BQ9UPU7 963 aa30.07■■■□□ 2.4
FAM228B-208ENST00000613899 DLEC1Q9Y238 1755 aa30.07■■■□□ 2.4
FAM228B-208ENST00000613899 DALRD3Q5D0E6 543 aaKnown RBP30.06■■■□□ 2.4
FAM228B-208ENST00000613899 PNISRQ8TF01 805 aaKnown RBP30.06■■■□□ 2.4
FAM228B-208ENST00000613899 CHRNA5P30532 468 aa30.05■■■□□ 2.4
FAM228B-208ENST00000613899 C1QTNF8P60827 252 aa30.05■■■□□ 2.4
FAM228B-208ENST00000613899 BICDL1Q6ZP65 573 aa30.05■■■□□ 2.4
FAM228B-208ENST00000613899 PRAMEF22A3QJZ6 481 aa30.04■■■□□ 2.4
FAM228B-208ENST00000613899 ARHGAP27Q6ZUM4 889 aa30.04■■■□□ 2.4
FAM228B-208ENST00000613899 CARMIL3Q8ND23 1372 aa30.03■■■□□ 2.4
FAM228B-208ENST00000613899 TBC1D9BQ66K14 1250 aa30.03■■■□□ 2.4
FAM228B-208ENST00000613899 DZIP3Q86Y13 1208 aaKnown RBP30.03■■■□□ 2.4
FAM228B-208ENST00000613899 GPBP1L1Q9HC44 474 aaPredicted RBP30.03■■■□□ 2.4
FAM228B-208ENST00000613899 CAMTA2O94983 1202 aa30.02■■■□□ 2.4
FAM228B-208ENST00000613899 MIS18AQ9NYP9 233 aa30■■■□□ 2.39
FAM228B-208ENST00000613899 PIP4K2AP48426 406 aaPredicted RBP29.99■■■□□ 2.39
FAM228B-208ENST00000613899 ANKRD31Q8N7Z5 1873 aa29.98■■■□□ 2.39
FAM228B-208ENST00000613899 ZNF526Q8TF50 670 aaPredicted RBP29.97■■■□□ 2.39
FAM228B-208ENST00000613899 SETDB2Q96T68 719 aa29.97■■■□□ 2.39
FAM228B-208ENST00000613899 THUMPD2Q9BTF0 503 aaKnown RBP29.97■■■□□ 2.39
FAM228B-208ENST00000613899 ZNF652Q9Y2D9 606 aa29.96■■■□□ 2.39
FAM228B-208ENST00000613899 CLEC4GQ6UXB4 293 aa29.95■■■□□ 2.39
FAM228B-208ENST00000613899 PDZRN3Q9UPQ7 1066 aa29.95■■■□□ 2.39
FAM228B-208ENST00000613899 NBPF26B4DH59 902 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 H0YIN7 160 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 RGL2O15211 777 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 LMOD3Q0VAK6 560 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 PRR5LQ6MZQ0 368 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 NBPF10Q6P3W6 841 aaKnown RBP29.94■■■□□ 2.38
FAM228B-208ENST00000613899 C2CD5Q86YS7 1000 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 NBPF15Q8N660 670 aa29.94■■■□□ 2.38
FAM228B-208ENST00000613899 NPHP1O15259 732 aa29.93■■■□□ 2.38
FAM228B-208ENST00000613899 PDE6BP35913 854 aa29.93■■■□□ 2.38
FAM228B-208ENST00000613899 RIPK4P57078 832 aa29.93■■■□□ 2.38
FAM228B-208ENST00000613899 EIF4A1P60842 406 aaKnown RBP29.93■■■□□ 2.38
FAM228B-208ENST00000613899 CNBD1Q8NA66 436 aa29.93■■■□□ 2.38
FAM228B-208ENST00000613899 BRIP1Q9BX63 1249 aa29.93■■■□□ 2.38
FAM228B-208ENST00000613899 TTLL6Q8N841 843 aa29.92■■■□□ 2.38
FAM228B-208ENST00000613899 COL11A2P13942 1736 aaPredicted RBP29.91■■■□□ 2.38
FAM228B-208ENST00000613899 WDR43Q15061 677 aaKnown RBP eCLIP29.91■■■□□ 2.38
FAM228B-208ENST00000613899 TMPOP42166 694 aaKnown RBP29.9■■■□□ 2.38
FAM228B-208ENST00000613899 ST5P78524 1137 aa29.9■■■□□ 2.38
FAM228B-208ENST00000613899 C9orf131Q5VYM1 1079 aa29.9■■■□□ 2.38
FAM228B-208ENST00000613899 SBF1O95248 1867 aa29.89■■■□□ 2.38
FAM228B-208ENST00000613899 SENP3-EIF4A1A0A087X0R7 540 aa29.89■■■□□ 2.38
FAM228B-208ENST00000613899 PRKRIP1Q9H875 184 aaPredicted RBP29.88■■■□□ 2.37
FAM228B-208ENST00000613899 TSPYL4Q9UJ04 414 aa29.88■■■□□ 2.37
FAM228B-208ENST00000613899 NBPF5PQ86XG9 351 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms