RNA–Protein interactions for RNA: ENST00000612060.1

SCN5A-214, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-214ENST00000612060 KIAA1551Q9HCM1 1747 aa23.27■■□□□ 1.32
SCN5A-214ENST00000612060 A0A087WZG4 1122 aa23.26■■□□□ 1.31
SCN5A-214ENST00000612060 DALRD3Q5D0E6 543 aaKnown RBP23.26■■□□□ 1.31
SCN5A-214ENST00000612060 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
SCN5A-214ENST00000612060 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
SCN5A-214ENST00000612060 DDR1Q08345 913 aa23.25■■□□□ 1.31
SCN5A-214ENST00000612060 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
SCN5A-214ENST00000612060 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
SCN5A-214ENST00000612060 UBR2Q8IWV8 1755 aa23.23■■□□□ 1.31
SCN5A-214ENST00000612060 POLRMTO00411 1230 aaKnown RBP23.23■■□□□ 1.31
SCN5A-214ENST00000612060 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
SCN5A-214ENST00000612060 ZNF790Q6PG37 636 aa23.22■■□□□ 1.31
SCN5A-214ENST00000612060 RTF1Q92541 710 aaKnown RBP23.22■■□□□ 1.31
SCN5A-214ENST00000612060 NEFMP07197 916 aa23.21■■□□□ 1.31
SCN5A-214ENST00000612060 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
SCN5A-214ENST00000612060 TM4SF1P30408 202 aa23.21■■□□□ 1.31
SCN5A-214ENST00000612060 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
SCN5A-214ENST00000612060 FMNL2Q96PY5 1086 aa23.21■■□□□ 1.31
SCN5A-214ENST00000612060 ZNF330Q9Y3S2 320 aaPredicted RBP23.21■■□□□ 1.31
SCN5A-214ENST00000612060 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
SCN5A-214ENST00000612060 BRCA1P38398 1863 aaKnown RBP23.21■■□□□ 1.31
SCN5A-214ENST00000612060 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
SCN5A-214ENST00000612060 NFIXQ14938 502 aa23.19■■□□□ 1.3
SCN5A-214ENST00000612060 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
SCN5A-214ENST00000612060 ZNF496Q96IT1 587 aaPredicted RBP23.19■■□□□ 1.3
SCN5A-214ENST00000612060 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
SCN5A-214ENST00000612060 CHRNA5P30532 468 aa23.18■■□□□ 1.3
SCN5A-214ENST00000612060 SERPINB2P05120 415 aa23.17■■□□□ 1.3
SCN5A-214ENST00000612060 KCNA3P22001 575 aa23.17■■□□□ 1.3
SCN5A-214ENST00000612060 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
SCN5A-214ENST00000612060 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
SCN5A-214ENST00000612060 NPHP1O15259 732 aa23.16■■□□□ 1.3
SCN5A-214ENST00000612060 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
SCN5A-214ENST00000612060 HSPA6P17066 643 aa23.15■■□□□ 1.3
SCN5A-214ENST00000612060 EIF5P55010 431 aaKnown RBP23.15■■□□□ 1.3
SCN5A-214ENST00000612060 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
SCN5A-214ENST00000612060 C16orf71Q8IYS4 520 aaPredicted RBP23.15■■□□□ 1.3
SCN5A-214ENST00000612060 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.3
SCN5A-214ENST00000612060 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.3
SCN5A-214ENST00000612060 IL6STP40189 918 aaPredicted RBP23.14■■□□□ 1.29
SCN5A-214ENST00000612060 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.29
SCN5A-214ENST00000612060 KDM2BQ8NHM5 1336 aa23.13■■□□□ 1.29
SCN5A-214ENST00000612060 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
SCN5A-214ENST00000612060 H0YIN7 160 aa23.13■■□□□ 1.29
SCN5A-214ENST00000612060 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
SCN5A-214ENST00000612060 KIF3CO14782 793 aa23.12■■□□□ 1.29
SCN5A-214ENST00000612060 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
SCN5A-214ENST00000612060 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
SCN5A-214ENST00000612060 TTLL6Q8N841 843 aa23.11■■□□□ 1.29
SCN5A-214ENST00000612060 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
SCN5A-214ENST00000612060 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
SCN5A-214ENST00000612060 NRXN2Q9P2S2 1712 aa23.11■■□□□ 1.29
SCN5A-214ENST00000612060 TOMM70O94826 608 aa23.1■■□□□ 1.29
SCN5A-214ENST00000612060 TBC1D2BQ9UPU7 963 aa23.1■■□□□ 1.29
SCN5A-214ENST00000612060 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
SCN5A-214ENST00000612060 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
SCN5A-214ENST00000612060 PDE6BP35913 854 aa23.09■■□□□ 1.29
SCN5A-214ENST00000612060 SETDB2Q96T68 719 aa23.09■■□□□ 1.29
SCN5A-214ENST00000612060 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
SCN5A-214ENST00000612060 MCM10Q7L590 875 aa23.08■■□□□ 1.29
SCN5A-214ENST00000612060 A1BGP04217 495 aa23.07■■□□□ 1.28
SCN5A-214ENST00000612060 TBC1D9BQ66K14 1250 aa23.07■■□□□ 1.28
SCN5A-214ENST00000612060 ZNF652Q9Y2D9 606 aa23.07■■□□□ 1.28
SCN5A-214ENST00000612060 DLEC1Q9Y238 1755 aa23.06■■□□□ 1.28
SCN5A-214ENST00000612060 ST5P78524 1137 aa23.06■■□□□ 1.28
SCN5A-214ENST00000612060 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
SCN5A-214ENST00000612060 CNBD1Q8NA66 436 aa23.06■■□□□ 1.28
SCN5A-214ENST00000612060 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
SCN5A-214ENST00000612060 NMRK2Q9NPI5 230 aa23.06■■□□□ 1.28
SCN5A-214ENST00000612060 ZC3H4Q9UPT8 1303 aaKnown RBP23.06■■□□□ 1.28
SCN5A-214ENST00000612060 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
SCN5A-214ENST00000612060 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
SCN5A-214ENST00000612060 LMNB1P20700 586 aa23.04■■□□□ 1.28
SCN5A-214ENST00000612060 APLP1P51693 650 aa23.04■■□□□ 1.28
SCN5A-214ENST00000612060 KCNQ3O43525 872 aa23.03■■□□□ 1.28
SCN5A-214ENST00000612060 TAF7Q15545 349 aaPredicted RBP23.02■■□□□ 1.28
SCN5A-214ENST00000612060 PRR5LQ6MZQ0 368 aa23.02■■□□□ 1.28
SCN5A-214ENST00000612060 RBM46Q8TBY0 533 aaKnown RBP23.02■■□□□ 1.28
SCN5A-214ENST00000612060 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
SCN5A-214ENST00000612060 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
SCN5A-214ENST00000612060 CAMTA2O94983 1202 aa23.01■■□□□ 1.27
SCN5A-214ENST00000612060 RASSF7Q02833 373 aa23.01■■□□□ 1.27
SCN5A-214ENST00000612060 USP16Q9Y5T5 823 aa23.01■■□□□ 1.27
SCN5A-214ENST00000612060 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
SCN5A-214ENST00000612060 DCTN1Q14203 1278 aa23■■□□□ 1.27
SCN5A-214ENST00000612060 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
SCN5A-214ENST00000612060 NBPF5PQ86XG9 351 aaPredicted RBP23■■□□□ 1.27
SCN5A-214ENST00000612060 SBF1O95248 1867 aa23■■□□□ 1.27
SCN5A-214ENST00000612060 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
SCN5A-214ENST00000612060 CNKSR1Q969H4 720 aa22.99■■□□□ 1.27
SCN5A-214ENST00000612060 SOGA3Q5TF21 947 aa22.98■■□□□ 1.27
SCN5A-214ENST00000612060 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
SCN5A-214ENST00000612060 FSTL1Q12841 308 aa22.97■■□□□ 1.27
SCN5A-214ENST00000612060 RRAGCQ9HB90 399 aa22.97■■□□□ 1.27
SCN5A-214ENST00000612060 CCDC24Q8N4L8 307 aa22.96■■□□□ 1.27
SCN5A-214ENST00000612060 ZNF219Q9P2Y4 722 aaPredicted RBP22.96■■□□□ 1.27
SCN5A-214ENST00000612060 ANKRD31Q8N7Z5 1873 aa22.96■■□□□ 1.27
SCN5A-214ENST00000612060 PRAMEF22A3QJZ6 481 aa22.95■■□□□ 1.26
SCN5A-214ENST00000612060 RGL2O15211 777 aa22.95■■□□□ 1.26
SCN5A-214ENST00000612060 C21orf2O43822 256 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms