RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	ZKSCAN5	Q9Y2L8	839 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	MPRIP	Q6WCQ1	1025 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	PPP1R42	Q7Z4L9	355 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	UNC5CL	Q8IV45	518 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	USP31	Q70CQ4	1352 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	LRRC59	Q96AG4	307 aa	Known RBP	13.9	□□□□□ -0.18
EP400-208	ENST00000611841	SRCIN1	Q9C0H9	1055 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	NRXN3	Q9Y4C0	1643 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	KCNQ3	O43525	872 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	LARP6	Q9BRS8	491 aa	Known RBP	13.89	□□□□□ -0.19
EP400-208	ENST00000611841	ESYT1	Q9BSJ8	1104 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PALD1	Q9ULE6	856 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PHF8	Q9UPP1	1060 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PI4KAP2	A4QPH2	592 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PTMA	P06454	111 aa	Known RBP	13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PI4KAP1	Q8N8J0	262 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	TMX3	Q96JJ7	454 aa		13.89	□□□□□ -0.19
EP400-208	ENST00000611841	PRIM1	P49642	420 aa	Known RBP	13.88	□□□□□ -0.19
EP400-208	ENST00000611841	CWC22	Q9HCG8	908 aa	Known RBP	13.88	□□□□□ -0.19
EP400-208	ENST00000611841	TULP1	O00294	542 aa	Predicted RBP	13.88	□□□□□ -0.19
EP400-208	ENST00000611841	NBPF6	Q5VWK0	638 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	RNF214	Q8ND24	703 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	NBPF4	Q96M43	638 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	TMEM51	Q9NW97	253 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	CHPF2	Q9P2E5	772 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	RBM27	Q9P2N5	1060 aa	Known RBP	13.88	□□□□□ -0.19
EP400-208	ENST00000611841	CHML	P26374	656 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	ATP2B3	Q16720	1220 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	KLHL40	Q2TBA0	621 aa		13.88	□□□□□ -0.19
EP400-208	ENST00000611841	CGN	Q9P2M7	1197 aa	Known RBP	13.88	□□□□□ -0.19
EP400-208	ENST00000611841	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.87	□□□□□ -0.19
EP400-208	ENST00000611841	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.87	□□□□□ -0.19
EP400-208	ENST00000611841	DLG5	Q8TDM6	1919 aa		13.87	□□□□□ -0.19
EP400-208	ENST00000611841	HTATSF1	O43719	755 aa	Known RBP	13.87	□□□□□ -0.19
EP400-208	ENST00000611841	ZSCAN23	Q3MJ62	389 aa		13.87	□□□□□ -0.19
EP400-208	ENST00000611841	DTNB	O60941	627 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	BTBD11	A6QL63	1104 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	AIMP1	Q12904	312 aa	Known RBP	13.86	□□□□□ -0.19
EP400-208	ENST00000611841	HS1BP3	Q53T59	392 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	OSBPL3	Q9H4L5	887 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.86	□□□□□ -0.19
EP400-208	ENST00000611841	MAP3K5	Q99683	1374 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	KIF20A	O95235	890 aa		13.86	□□□□□ -0.19
EP400-208	ENST00000611841	GTPBP4	Q9BZE4	634 aa	Known RBP	13.86	□□□□□ -0.19
EP400-208	ENST00000611841	LMBRD1	Q9NUN5	540 aa		13.85	□□□□□ -0.19
EP400-208	ENST00000611841	CWC27	Q6UX04	472 aa	Known RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	RHPN1	Q8TCX5	695 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	CDK11B	P21127	795 aa	Known RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	ZNF710	Q8N1W2	664 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	DNAAF4	Q8WXU2	420 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	ZNF830	Q96NB3	372 aa	Predicted RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	GDPD2	Q9HCC8	539 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	KDR	P35968	1356 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	RERE	Q9P2R6	1566 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	SETD1A	O15047	1707 aa	Known RBP	13.84	□□□□□ -0.19
EP400-208	ENST00000611841	C1orf141	Q5JVX7	400 aa		13.84	□□□□□ -0.19
EP400-208	ENST00000611841	LETM1	O95202	739 aa	Predicted RBP	13.83	□□□□□ -0.2
EP400-208	ENST00000611841	SPG7	Q9UQ90	795 aa		13.83	□□□□□ -0.2
EP400-208	ENST00000611841	ZDHHC9	Q9Y397	364 aa		13.83	□□□□□ -0.2
EP400-208	ENST00000611841	DDX54	Q8TDD1	881 aa	Known RBP	13.83	□□□□□ -0.2
EP400-208	ENST00000611841	KNDC1	Q76NI1	1749 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.82	□□□□□ -0.2
EP400-208	ENST00000611841	PDLIM2	Q96JY6	352 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	IL25	Q9H293	177 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	SSH2	Q76I76	1423 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.82	□□□□□ -0.2
EP400-208	ENST00000611841	C3	P01024	1663 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	EIF4A1	P60842	406 aa	Known RBP	13.82	□□□□□ -0.2
EP400-208	ENST00000611841	IP6K1	Q92551	441 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	CCDC39	Q9UFE4	941 aa		13.82	□□□□□ -0.2
EP400-208	ENST00000611841	SYCE3	A1L190	88 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	IPO4	Q8TEX9	1081 aa	Known RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	SOS1	Q07889	1333 aa	Predicted RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	ITSN1	Q15811	1721 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	ZNF445	P59923	1031 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	MYRIP	Q8NFW9	859 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	MON2	Q7Z3U7	1717 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	ANKLE2	Q86XL3	938 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	SSH3	Q8TE77	659 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	KIF1BP	Q96EK5	621 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	ORAI2	Q96SN7	254 aa		13.81	□□□□□ -0.2
EP400-208	ENST00000611841	PA2G4	Q9UQ80	394 aa	Known RBP	13.81	□□□□□ -0.2
EP400-208	ENST00000611841	KCNJ4	P48050	445 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	MCM2	P49736	904 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	KIAA2012	Q0VF49	1180 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	CWF19L2	Q2TBE0	894 aa	Known RBP	13.8	□□□□□ -0.2
EP400-208	ENST00000611841	GPT2	Q8TD30	523 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.8	□□□□□ -0.2
EP400-208	ENST00000611841	PRAMEF22	A3QJZ6	481 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	CPA1	P15085	419 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	CLASRP	Q8N2M8	674 aa	Known RBP	13.8	□□□□□ -0.2
EP400-208	ENST00000611841	DIAPH3	Q9NSV4	1193 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	MAP3K2	Q9Y2U5	619 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	AK9	Q5TCS8	1911 aa		13.8	□□□□□ -0.2
EP400-208	ENST00000611841	CYP2E1	P05181	493 aa	Predicted RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 709.3 ms