RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.2
MUC1-223ENST00000611571 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
MUC1-223ENST00000611571 GAS2L3Q86XJ1 694 aa16.33■□□□□ 0.2
MUC1-223ENST00000611571 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
MUC1-223ENST00000611571 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
MUC1-223ENST00000611571 ZNF165P49910 485 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 C17orf53Q8N3J3 647 aaPredicted RBP16.32■□□□□ 0.2
MUC1-223ENST00000611571 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
MUC1-223ENST00000611571 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
MUC1-223ENST00000611571 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
MUC1-223ENST00000611571 UBE3BQ7Z3V4 1068 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 NSD2O96028 1365 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 ZMYM4Q5VZL5 1548 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
MUC1-223ENST00000611571 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
MUC1-223ENST00000611571 RBM25P49756 843 aaKnown RBP16.31■□□□□ 0.2
MUC1-223ENST00000611571 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 A0A087WZG4 1122 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 TEX35Q5T0J7 233 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 NUP160Q12769 1436 aa16.31■□□□□ 0.2
MUC1-223ENST00000611571 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 DBF4Q9UBU7 674 aaPredicted RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 TNNT1P13805 278 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 HSP90AA4PQ58FG1 418 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 ARHGEF12Q9NZN5 1544 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 G3V3G9 751 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 GOLIM4O00461 696 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 GPS2Q13227 327 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 CWF19L2Q2TBE0 894 aaKnown RBP16.3■□□□□ 0.2
MUC1-223ENST00000611571 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 BRF1Q92994 677 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
MUC1-223ENST00000611571 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.29■□□□□ 0.2
MUC1-223ENST00000611571 V9GYY5 206 aaPredicted RBP16.29■□□□□ 0.2
MUC1-223ENST00000611571 AK2P54819 239 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 UBE2HP62256 183 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
MUC1-223ENST00000611571 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
MUC1-223ENST00000611571 CHMLP26374 656 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
MUC1-223ENST00000611571 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
MUC1-223ENST00000611571 RBM8AQ9Y5S9 174 aaKnown RBP16.28■□□□□ 0.2
MUC1-223ENST00000611571 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
MUC1-223ENST00000611571 KRT32Q14532 448 aa16.27■□□□□ 0.2
MUC1-223ENST00000611571 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.2
MUC1-223ENST00000611571 TSC1Q92574 1164 aa16.27■□□□□ 0.2
MUC1-223ENST00000611571 KLHL10Q6JEL2 608 aa16.27■□□□□ 0.2
MUC1-223ENST00000611571 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.19
MUC1-223ENST00000611571 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.19
MUC1-223ENST00000611571 FSIP1Q8NA03 581 aa16.27■□□□□ 0.19
MUC1-223ENST00000611571 PHF8Q9UPP1 1060 aa16.27■□□□□ 0.19
MUC1-223ENST00000611571 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.19
MUC1-223ENST00000611571 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
MUC1-223ENST00000611571 EYA1Q99502 592 aa16.26■□□□□ 0.19
MUC1-223ENST00000611571 ZNF521Q96K83 1311 aa16.26■□□□□ 0.19
MUC1-223ENST00000611571 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
MUC1-223ENST00000611571 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
MUC1-223ENST00000611571 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
MUC1-223ENST00000611571 DUOX2Q9NRD8 1548 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
MUC1-223ENST00000611571 SYT1P21579 422 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 HSP90B2PQ58FF3 399 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
MUC1-223ENST00000611571 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
MUC1-223ENST00000611571 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 MSH6P52701 1360 aa16.25■□□□□ 0.19
MUC1-223ENST00000611571 CHRNA2Q15822 529 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 C8orf76Q96K31 380 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
MUC1-223ENST00000611571 GPTP24298 496 aa16.24■□□□□ 0.19
MUC1-223ENST00000611571 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
MUC1-223ENST00000611571 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms