RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SOS2Q07890 1332 aaPredicted RBP14.74□□□□□ -0.05
USP6NL-206ENST00000609853 PARP4Q9UKK3 1724 aaKnown RBP14.74□□□□□ -0.05
USP6NL-206ENST00000609853 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
USP6NL-206ENST00000609853 PDE1AP54750 535 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 POLA2Q14181 598 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 ZNF790Q6PG37 636 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
USP6NL-206ENST00000609853 ADCY9O60503 1353 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 KDM6AO15550 1401 aaPredicted RBP14.73□□□□□ -0.05
USP6NL-206ENST00000609853 PNMA6EA0A0J9YXQ4 647 aa14.73□□□□□ -0.05
USP6NL-206ENST00000609853 SDSP20132 328 aa14.73□□□□□ -0.05
USP6NL-206ENST00000609853 SLAIN2Q9P270 581 aa14.73□□□□□ -0.05
USP6NL-206ENST00000609853 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
USP6NL-206ENST00000609853 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
USP6NL-206ENST00000609853 CABLES1Q8TDN4 633 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 TUBGCP6Q96RT7 1819 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 APBB1O00213 710 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 REC8O95072 547 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 MTX1Q13505 466 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
USP6NL-206ENST00000609853 OTUD7AQ8TE49 926 aaPredicted RBP14.72□□□□□ -0.05
USP6NL-206ENST00000609853 MX1P20591 662 aa14.71□□□□□ -0.05
USP6NL-206ENST00000609853 DEKP35659 375 aaKnown RBP14.71□□□□□ -0.05
USP6NL-206ENST00000609853 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.05
USP6NL-206ENST00000609853 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
USP6NL-206ENST00000609853 WDR17Q8IZU2 1322 aa14.7□□□□□ -0.06
USP6NL-206ENST00000609853 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
USP6NL-206ENST00000609853 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
USP6NL-206ENST00000609853 NFATC2IPQ8NCF5 419 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 KIF2CQ99661 725 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
USP6NL-206ENST00000609853 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 UTYO14607 1347 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 SRGAP3O43295 1099 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 RABEP1Q15276 862 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 USP26Q9BXU7 913 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 PRDM11Q9NQV5 511 aa14.69□□□□□ -0.06
USP6NL-206ENST00000609853 C9orf78Q9NZ63 289 aaPredicted RBP14.69□□□□□ -0.06
USP6NL-206ENST00000609853 ERC2O15083 957 aa14.68□□□□□ -0.06
USP6NL-206ENST00000609853 CYP27B1O15528 508 aa14.68□□□□□ -0.06
USP6NL-206ENST00000609853 SNRPA1P09661 255 aaKnown RBP14.68□□□□□ -0.06
USP6NL-206ENST00000609853 NBPF7P0C2Y1 421 aaPredicted RBP14.68□□□□□ -0.06
USP6NL-206ENST00000609853 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
USP6NL-206ENST00000609853 FMNL2Q96PY5 1086 aa14.68□□□□□ -0.06
USP6NL-206ENST00000609853 C5P01031 1676 aa14.68□□□□□ -0.06
USP6NL-206ENST00000609853 ABCA3Q99758 1704 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 PCDH11XQ9BZA7 1347 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 PCDH11YQ9BZA8 1340 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 NHSL1Q5SYE7 1610 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 EPB41L2O43491 1005 aaKnown RBP14.67□□□□□ -0.06
USP6NL-206ENST00000609853 SURF6O75683 361 aaKnown RBP14.67□□□□□ -0.06
USP6NL-206ENST00000609853 PDIA6Q15084 440 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
USP6NL-206ENST00000609853 CIZ1Q9ULV3 898 aaPredicted RBP14.67□□□□□ -0.06
USP6NL-206ENST00000609853 ZNF335Q9H4Z2 1342 aaPredicted RBP14.67□□□□□ -0.06
USP6NL-206ENST00000609853 ANXA1P04083 346 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 ERC1Q8IUD2 1116 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 FRAT2O75474 233 aaPredicted RBP14.66□□□□□ -0.06
USP6NL-206ENST00000609853 CABP4P57796 275 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 NEXNQ0ZGT2 675 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 CARD10Q9BWT7 1032 aa14.66□□□□□ -0.06
USP6NL-206ENST00000609853 COL5A2P05997 1499 aaPredicted RBP14.66□□□□□ -0.06
USP6NL-206ENST00000609853 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
USP6NL-206ENST00000609853 ERVV-2B6SEH9 535 aa14.65□□□□□ -0.06
USP6NL-206ENST00000609853 GRM8O00222 908 aa14.65□□□□□ -0.06
USP6NL-206ENST00000609853 SLC39A6Q13433 755 aa14.65□□□□□ -0.06
USP6NL-206ENST00000609853 ZCRB1Q8TBF4 217 aaKnown RBP14.65□□□□□ -0.06
USP6NL-206ENST00000609853 ZNF496Q96IT1 587 aaPredicted RBP14.65□□□□□ -0.06
USP6NL-206ENST00000609853 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
USP6NL-206ENST00000609853 K7ELQ4 463 aaPredicted RBP14.64□□□□□ -0.07
USP6NL-206ENST00000609853 NKX1-1Q15270 411 aaPredicted RBP14.64□□□□□ -0.07
USP6NL-206ENST00000609853 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
USP6NL-206ENST00000609853 BCL11AQ9H165 835 aa14.64□□□□□ -0.07
USP6NL-206ENST00000609853 USP42Q9H9J4 1324 aaKnown RBP14.64□□□□□ -0.07
USP6NL-206ENST00000609853 RIC3Q7Z5B4 369 aa14.63□□□□□ -0.07
USP6NL-206ENST00000609853 AK9Q5TCS8 1911 aa14.63□□□□□ -0.07
USP6NL-206ENST00000609853 DDIT3P35638 169 aa14.63□□□□□ -0.07
USP6NL-206ENST00000609853 METTL22Q9BUU2 404 aaPredicted RBP14.63□□□□□ -0.07
USP6NL-206ENST00000609853 TTC41PQ6P2S7 1318 aa14.62□□□□□ -0.07
USP6NL-206ENST00000609853 IL2RBP14784 551 aa14.62□□□□□ -0.07
USP6NL-206ENST00000609853 UBR2Q8IWV8 1755 aa14.62□□□□□ -0.07
USP6NL-206ENST00000609853 MCCP23508 829 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 GSE1Q14687 1217 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 ANKRD13DQ6ZTN6 518 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 ESYT1Q9BSJ8 1104 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 COL15A1P39059 1388 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 TRIM6-TRIM34B2RNG4 842 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 ST18O60284 1047 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 CHMLP26374 656 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 ANAPC15P60006 121 aa14.61□□□□□ -0.07
USP6NL-206ENST00000609853 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
USP6NL-206ENST00000609853 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms