RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 SMC2O95347 1197 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 IFIT5Q13325 482 aaKnown RBP12.96□□□□□ -0.34
SHANK2-219ENST00000606715 SKIDA1Q1XH10 827 aa12.96□□□□□ -0.34
SHANK2-219ENST00000606715 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.34
SHANK2-219ENST00000606715 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 MPHOSPH6Q99547 160 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 ERLIN2O94905 339 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 MAP4K4O95819 1239 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 NEK4P51957 841 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 SEPT7Q16181 437 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
SHANK2-219ENST00000606715 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SHANK2-219ENST00000606715 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-219ENST00000606715 MYD88Q99836 296 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 AEBP1Q8IUX7 1158 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
SHANK2-219ENST00000606715 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
SHANK2-219ENST00000606715 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
SHANK2-219ENST00000606715 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-219ENST00000606715 ANKRD18BA2A2Z9 1011 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 DDB1Q16531 1140 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 WASF1Q92558 559 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 NF2P35240 595 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
SHANK2-219ENST00000606715 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-219ENST00000606715 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
SHANK2-219ENST00000606715 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 SLC5A1P13866 664 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 RARSP54136 660 aaKnown RBP12.93□□□□□ -0.34
SHANK2-219ENST00000606715 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 FLT4P35916 1363 aa12.93□□□□□ -0.34
SHANK2-219ENST00000606715 DNMT1P26358 1616 aaKnown RBP12.93□□□□□ -0.34
SHANK2-219ENST00000606715 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
SHANK2-219ENST00000606715 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-219ENST00000606715 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-219ENST00000606715 IMMTQ16891 758 aaKnown RBP12.92□□□□□ -0.34
SHANK2-219ENST00000606715 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
SHANK2-219ENST00000606715 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
SHANK2-219ENST00000606715 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
SHANK2-219ENST00000606715 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-219ENST00000606715 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 NPATQ14207 1427 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 MBD3O95983 291 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 FLIIQ13045 1269 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
SHANK2-219ENST00000606715 CHD1O14646 1710 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 CHRNA2Q15822 529 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 ERCC4Q92889 916 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-219ENST00000606715 CWC25Q9NXE8 425 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-219ENST00000606715 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
SHANK2-219ENST00000606715 IL2RBP14784 551 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 ME1P48163 572 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 CCDC150Q8NCX0 1101 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 MYO5CQ9NQX4 1742 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
SHANK2-219ENST00000606715 ABCC1P33527 1531 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 SERPINC1P01008 464 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 LIG1P18858 919 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-219ENST00000606715 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 MAP3K9P80192 1104 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 TRIM5Q9C035 493 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-219ENST00000606715 LDHCP07864 332 aa12.89□□□□□ -0.35
SHANK2-219ENST00000606715 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-219ENST00000606715 MX1P20591 662 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 GPTP24298 496 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 GSE1Q14687 1217 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 CEP57L1Q8IYX8 460 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 ABCA8O94911 1581 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms