RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 COL18A1P39060 1754 aa17.55■□□□□ 0.4
HLA-F-230ENST00000606273 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
HLA-F-230ENST00000606273 PTPN5P54829 565 aa17.54■□□□□ 0.4
HLA-F-230ENST00000606273 SLC27A3Q5K4L6 730 aa17.54■□□□□ 0.4
HLA-F-230ENST00000606273 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
HLA-F-230ENST00000606273 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
HLA-F-230ENST00000606273 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
HLA-F-230ENST00000606273 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
HLA-F-230ENST00000606273 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
HLA-F-230ENST00000606273 E2F4Q16254 413 aa17.52■□□□□ 0.4
HLA-F-230ENST00000606273 C6orf132Q5T0Z8 1188 aa17.52■□□□□ 0.4
HLA-F-230ENST00000606273 AKAP12Q02952 1782 aa17.52■□□□□ 0.4
HLA-F-230ENST00000606273 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
HLA-F-230ENST00000606273 PDIA6Q15084 440 aa17.51■□□□□ 0.39
HLA-F-230ENST00000606273 WNT2BQ93097 391 aa17.51■□□□□ 0.39
HLA-F-230ENST00000606273 WDR70Q9NW82 654 aa17.51■□□□□ 0.39
HLA-F-230ENST00000606273 KCNQ4P56696 695 aa17.5■□□□□ 0.39
HLA-F-230ENST00000606273 THSD4Q6ZMP0 1018 aa17.5■□□□□ 0.39
HLA-F-230ENST00000606273 RABGEF1Q9UJ41 708 aa17.5■□□□□ 0.39
HLA-F-230ENST00000606273 NHSQ6T4R5 1651 aa17.5■□□□□ 0.39
HLA-F-230ENST00000606273 ADCY9O60503 1353 aa17.5■□□□□ 0.39
HLA-F-230ENST00000606273 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
HLA-F-230ENST00000606273 IL2RBP14784 551 aa17.48■□□□□ 0.39
HLA-F-230ENST00000606273 APLP1P51693 650 aa17.48■□□□□ 0.39
HLA-F-230ENST00000606273 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
HLA-F-230ENST00000606273 SPDYE16A6NNV3 312 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-230ENST00000606273 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
HLA-F-230ENST00000606273 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
HLA-F-230ENST00000606273 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
HLA-F-230ENST00000606273 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
HLA-F-230ENST00000606273 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
HLA-F-230ENST00000606273 COL13A1Q5TAT6 717 aaPredicted RBP17.45■□□□□ 0.38
HLA-F-230ENST00000606273 TRPM1Q7Z4N2 1603 aa17.45■□□□□ 0.38
HLA-F-230ENST00000606273 ABCC6O95255 1503 aa17.44■□□□□ 0.38
HLA-F-230ENST00000606273 NBR1Q14596 966 aa17.44■□□□□ 0.38
HLA-F-230ENST00000606273 KIAA1468Q9P260 1216 aa17.43■□□□□ 0.38
HLA-F-230ENST00000606273 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-230ENST00000606273 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
HLA-F-230ENST00000606273 BTAF1O14981 1849 aa17.42■□□□□ 0.38
HLA-F-230ENST00000606273 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
HLA-F-230ENST00000606273 MSL1Q68DK7 614 aa17.41■□□□□ 0.38
HLA-F-230ENST00000606273 ARIH1Q9Y4X5 557 aaPredicted RBP17.41■□□□□ 0.38
HLA-F-230ENST00000606273 PIK3C2AO00443 1686 aa17.41■□□□□ 0.38
HLA-F-230ENST00000606273 TOMM70O94826 608 aa17.4■□□□□ 0.38
HLA-F-230ENST00000606273 QSER1Q2KHR3 1735 aa17.4■□□□□ 0.38
HLA-F-230ENST00000606273 MAP3K7O43318 606 aa17.39■□□□□ 0.37
HLA-F-230ENST00000606273 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
HLA-F-230ENST00000606273 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
HLA-F-230ENST00000606273 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
HLA-F-230ENST00000606273 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
HLA-F-230ENST00000606273 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-230ENST00000606273 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
HLA-F-230ENST00000606273 PRELPP51888 382 aa17.37■□□□□ 0.37
HLA-F-230ENST00000606273 TSR1Q2NL82 804 aaKnown RBP17.37■□□□□ 0.37
HLA-F-230ENST00000606273 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
HLA-F-230ENST00000606273 NFAT5O94916 1531 aa17.37■□□□□ 0.37
HLA-F-230ENST00000606273 ANKK1Q8NFD2 765 aa17.36■□□□□ 0.37
HLA-F-230ENST00000606273 LAPTM4BQ86VI4 370 aa17.35■□□□□ 0.37
HLA-F-230ENST00000606273 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
HLA-F-230ENST00000606273 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
HLA-F-230ENST00000606273 TNS4Q8IZW8 715 aa17.34■□□□□ 0.37
HLA-F-230ENST00000606273 JMYQ8N9B5 988 aa17.34■□□□□ 0.37
HLA-F-230ENST00000606273 NSD2O96028 1365 aa17.33■□□□□ 0.36
HLA-F-230ENST00000606273 EVC2Q86UK5 1308 aa17.33■□□□□ 0.36
HLA-F-230ENST00000606273 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
HLA-F-230ENST00000606273 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
HLA-F-230ENST00000606273 KLRG1Q96E93 195 aa17.33■□□□□ 0.36
HLA-F-230ENST00000606273 SEPT9Q9UHD8 586 aaPredicted RBP17.33■□□□□ 0.36
HLA-F-230ENST00000606273 FLAD1Q8NFF5 587 aa17.32■□□□□ 0.36
HLA-F-230ENST00000606273 TSHZ2Q9NRE2 1034 aa17.32■□□□□ 0.36
HLA-F-230ENST00000606273 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
HLA-F-230ENST00000606273 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
HLA-F-230ENST00000606273 HTRA3P83110 453 aa17.3■□□□□ 0.36
HLA-F-230ENST00000606273 ZFRQ96KR1 1074 aaKnown RBP17.3■□□□□ 0.36
HLA-F-230ENST00000606273 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
HLA-F-230ENST00000606273 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
HLA-F-230ENST00000606273 BCAMP50895 628 aa17.29■□□□□ 0.36
HLA-F-230ENST00000606273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-F-230ENST00000606273 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
HLA-F-230ENST00000606273 USP47Q96K76 1375 aa17.28■□□□□ 0.36
HLA-F-230ENST00000606273 NME9Q86XW9 330 aa17.27■□□□□ 0.36
HLA-F-230ENST00000606273 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.36
HLA-F-230ENST00000606273 SOWAHBA6NEL2 793 aa17.26■□□□□ 0.35
HLA-F-230ENST00000606273 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
HLA-F-230ENST00000606273 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
HLA-F-230ENST00000606273 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
HLA-F-230ENST00000606273 TSKSQ9UJT2 592 aa17.26■□□□□ 0.35
HLA-F-230ENST00000606273 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
HLA-F-230ENST00000606273 LY75O60449 1722 aa17.25■□□□□ 0.35
HLA-F-230ENST00000606273 IP6K1Q92551 441 aa17.25■□□□□ 0.35
HLA-F-230ENST00000606273 L3MBTL2Q969R5 705 aa17.25■□□□□ 0.35
HLA-F-230ENST00000606273 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-230ENST00000606273 AMIGO3Q86WK7 504 aa17.24■□□□□ 0.35
HLA-F-230ENST00000606273 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
HLA-F-230ENST00000606273 PACS2Q86VP3 889 aa17.23■□□□□ 0.35
HLA-F-230ENST00000606273 OSBPP22059 807 aa17.22■□□□□ 0.35
HLA-F-230ENST00000606273 FSTL1Q12841 308 aa17.22■□□□□ 0.35
HLA-F-230ENST00000606273 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
HLA-F-230ENST00000606273 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
HLA-F-230ENST00000606273 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms