RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 KIF18AQ8NI77 898 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 GTF3C6Q969F1 213 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 MRVI1Q9Y6F6 885 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 ADCK5Q3MIX3 580 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
RER1-209ENST00000605895 PPFIA3O75145 1194 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 STK3Q13188 491 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 NUP62CLQ9H1M0 184 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
RER1-209ENST00000605895 GNAI2P04899 355 aa18.39■□□□□ 0.54
RER1-209ENST00000605895 TERF2Q15554 542 aa18.39■□□□□ 0.54
RER1-209ENST00000605895 ERCC4Q92889 916 aaPredicted RBP18.39■□□□□ 0.54
RER1-209ENST00000605895 TNMDQ9H2S6 317 aa18.39■□□□□ 0.54
RER1-209ENST00000605895 RGS12O14924 1447 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 CEP135Q66GS9 1140 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
RER1-209ENST00000605895 MTMR6Q9Y217 621 aa18.39■□□□□ 0.53
RER1-209ENST00000605895 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
RER1-209ENST00000605895 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
RER1-209ENST00000605895 KIAA1210Q9ULL0 1709 aa18.38■□□□□ 0.53
RER1-209ENST00000605895 ABCC1P33527 1531 aa18.38■□□□□ 0.53
RER1-209ENST00000605895 HSPA4P34932 840 aa18.38■□□□□ 0.53
RER1-209ENST00000605895 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
RER1-209ENST00000605895 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
RER1-209ENST00000605895 KIF1BO60333 1816 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 IDI1Q13907 227 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 FBXO38Q6PIJ6 1188 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 ADGRB1O14514 1584 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
RER1-209ENST00000605895 TET3O43151 1660 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
RER1-209ENST00000605895 SURF6O75683 361 aaKnown RBP18.36■□□□□ 0.53
RER1-209ENST00000605895 ANAPC15P60006 121 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
RER1-209ENST00000605895 KRT222Q8N1A0 295 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 OSBPL3Q9H4L5 887 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 TMEM87AQ8NBN3 555 aa18.36■□□□□ 0.53
RER1-209ENST00000605895 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
RER1-209ENST00000605895 ZNF165P49910 485 aa18.35■□□□□ 0.53
RER1-209ENST00000605895 ZNF75DP51815 510 aa18.35■□□□□ 0.53
RER1-209ENST00000605895 LRRN4CLQ8ND94 238 aa18.35■□□□□ 0.53
RER1-209ENST00000605895 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
RER1-209ENST00000605895 POLR3GO15318 223 aaPredicted RBP18.34■□□□□ 0.53
RER1-209ENST00000605895 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
RER1-209ENST00000605895 PTH1RQ03431 593 aa18.34■□□□□ 0.53
RER1-209ENST00000605895 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
RER1-209ENST00000605895 NR1I2O75469 434 aa18.33■□□□□ 0.52
RER1-209ENST00000605895 TPM3P06753 285 aa18.33■□□□□ 0.52
RER1-209ENST00000605895 GABPB1Q06547 395 aaPredicted RBP18.33■□□□□ 0.52
RER1-209ENST00000605895 ME3Q16798 604 aa18.33■□□□□ 0.52
RER1-209ENST00000605895 NPATQ14207 1427 aa18.33■□□□□ 0.52
RER1-209ENST00000605895 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
RER1-209ENST00000605895 TRIM34Q9BYJ4 488 aa18.33■□□□□ 0.52
RER1-209ENST00000605895 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
RER1-209ENST00000605895 PTPN14Q15678 1187 aa18.32■□□□□ 0.52
RER1-209ENST00000605895 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
RER1-209ENST00000605895 TTC14Q96N46 770 aa18.32■□□□□ 0.52
RER1-209ENST00000605895 TAOK2Q9UL54 1235 aa18.32■□□□□ 0.52
RER1-209ENST00000605895 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
RER1-209ENST00000605895 SKILP12757 684 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 ERCC6LQ2NKX8 1250 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 HYPKQ9NX55 129 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 RAD50Q92878 1312 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 CHL1O00533 1208 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 CAPN2P17655 700 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 ST3GAL1Q11201 340 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
RER1-209ENST00000605895 CAMSAP1Q5T5Y3 1602 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 KRT85P78386 507 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 CD163L1Q9NR16 1453 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 ATP7AQ04656 1500 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
RER1-209ENST00000605895 SGSM2O43147 1006 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 COG3Q96JB2 828 aa18.3■□□□□ 0.52
RER1-209ENST00000605895 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
RER1-209ENST00000605895 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
RER1-209ENST00000605895 GLI2P10070 1586 aa18.29■□□□□ 0.52
RER1-209ENST00000605895 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
RER1-209ENST00000605895 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
RER1-209ENST00000605895 ZNF446Q9NWS9 450 aa18.29■□□□□ 0.52
RER1-209ENST00000605895 PAXBP1Q9Y5B6 917 aa18.29■□□□□ 0.52
RER1-209ENST00000605895 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 TMX1Q9H3N1 280 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms