RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 CREBZFQ9NS37 354 aa21.17■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 MKRN1Q9UHC7 482 aaKnown RBP21.17■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 TIAM2Q8IVF5 1701 aa21.16■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 SERPINB2P05120 415 aa21.16■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 TJP1Q07157 1748 aa21.15■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 SOS1Q07889 1333 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
NEDD8-MDP1-204ENST00000605847 POTECB2RU33 542 aa21.14■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 NFKBIEO00221 500 aa21.14■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 CHADLQ6NUI6 762 aa21.14■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 COL15A1P39059 1388 aa21.13■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 ERFEQ4G0M1 354 aa21.13■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 FOXN1O15353 648 aa21.11■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 AEBP1Q8IUX7 1158 aa21.11■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 CYP19A1P11511 503 aaPredicted RBP21.1■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 ZNF622Q969S3 477 aaKnown RBP eCLIP21.1■□□□□ 0.971e-16■□□□□ 9.9
NEDD8-MDP1-204ENST00000605847 PRDM10Q9NQV6 1147 aa21.1■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 ZNF219Q9P2Y4 722 aaPredicted RBP21.1■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 BICDL1Q6ZP65 573 aa21.09■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 SLC52A2Q9HAB3 445 aa21.09■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 ZBTB1Q9Y2K1 713 aa21.09■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 C21orf2O43822 256 aa21.08■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 SULT6B1Q6IMI4 303 aa21.08■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 NRXN2Q9P2S2 1712 aa21.08■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
NEDD8-MDP1-204ENST00000605847 PDE6BP35913 854 aa21.07■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 AKAP4Q5JQC9 854 aa21.07■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 CNTNAP1P78357 1384 aa21.07■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 CARMIL3Q8ND23 1372 aa21.07■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 CCDC88AQ3V6T2 1871 aa21.06■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 DDNO94850 711 aaPredicted RBP21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 POTEIP0CG38 1075 aa21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 POTEJP0CG39 1038 aa21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 TAOK3Q9H2K8 898 aa21.05■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 IQCA1LA6NCM1 817 aa21.04■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 NPHP1O15259 732 aa21.03■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 SLC34A2O95436 690 aa21.03■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 LGR6Q9HBX8 967 aa21.03■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 SCN11AQ9UI33 1791 aa21.02■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 A0A087WZG4 1122 aa21.02■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 LDHDQ86WU2 507 aa21.02■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.96
NEDD8-MDP1-204ENST00000605847 LTBP3Q9NS15 1303 aa21.02■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 TMEM88BA6NKF7 163 aa21.01■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 VEGFBP49765 207 aa21.01■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 RNMTO43148 476 aaKnown RBP21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 STARD3NLO95772 234 aa21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 LBX1P52954 281 aa21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 SOGA3Q5TF21 947 aa21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 PASKQ96RG2 1323 aa21■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 CCDC24Q8N4L8 307 aa20.99■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 CNKSR1Q969H4 720 aa20.99■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 ZNF330Q9Y3S2 320 aaPredicted RBP20.99■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 EAPPQ56P03 285 aaPredicted RBP20.98■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 PRR5LQ6MZQ0 368 aa20.98■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 PANK3Q9H999 370 aa20.97■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 CLEC11AQ9Y240 323 aa20.97■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 DICER1Q9UPY3 1922 aaKnown RBP20.97■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 MRC1P22897 1456 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 IL13P35225 146 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 EIF5P55010 431 aaKnown RBP20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 ST5P78524 1137 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 FAM161AQ3B820 660 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 CNBD1Q8NA66 436 aa20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 TAF1DQ9H5J8 278 aaPredicted RBP20.96■□□□□ 0.95
NEDD8-MDP1-204ENST00000605847 PRPF40BQ6NWY9 871 aaKnown RBP20.95■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 ABHD8Q96I13 439 aa20.95■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 L3MBTL3Q96JM7 780 aaPredicted RBP20.95■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 STYK1Q6J9G0 422 aa20.94■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 SETDB2Q96T68 719 aa20.94■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 TBC1D2BQ9UPU7 963 aa20.94■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 ITGBL1O95965 494 aaPredicted RBP20.93■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 DEFB115Q30KQ5 88 aa20.93■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 MASTLQ96GX5 879 aa20.93■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 HACL1Q9UJ83 578 aa20.93■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 HMOX1P09601 288 aa20.92■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 TEX13AQ9BXU3 409 aaPredicted RBP20.92■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 COL11A2P13942 1736 aaPredicted RBP20.92■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 SRGNP10124 158 aa20.91■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 SCN4AP35499 1836 aa20.9■□□□□ 0.94
NEDD8-MDP1-204ENST00000605847 RASSF10A6NK89 507 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms