RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 CHRNA5P30532 468 aa31.29■■■□□ 2.6
GTPBP3-227ENST00000602056 NFIXQ14938 502 aa31.29■■■□□ 2.6
GTPBP3-227ENST00000602056 PHACTR3Q96KR7 559 aa31.29■■■□□ 2.6
GTPBP3-227ENST00000602056 GNAT3A8MTJ3 354 aa31.28■■■□□ 2.6
GTPBP3-227ENST00000602056 ZNF496Q96IT1 587 aaPredicted RBP31.28■■■□□ 2.6
GTPBP3-227ENST00000602056 PIM2Q9P1W9 311 aa31.28■■■□□ 2.6
GTPBP3-227ENST00000602056 KIF3CO14782 793 aa31.27■■■□□ 2.6
GTPBP3-227ENST00000602056 CANXP27824 592 aaKnown RBP31.26■■■□□ 2.59
GTPBP3-227ENST00000602056 RSPH6AQ9H0K4 717 aa31.26■■■□□ 2.59
GTPBP3-227ENST00000602056 ZNF790Q6PG37 636 aa31.25■■■□□ 2.59
GTPBP3-227ENST00000602056 TTC5Q8N0Z6 440 aa31.25■■■□□ 2.59
GTPBP3-227ENST00000602056 PRKAR2BP31323 418 aa31.24■■■□□ 2.59
GTPBP3-227ENST00000602056 TEFQ10587 303 aa31.24■■■□□ 2.59
GTPBP3-227ENST00000602056 EIF5P55010 431 aaKnown RBP31.23■■■□□ 2.59
GTPBP3-227ENST00000602056 DALRD3Q5D0E6 543 aaKnown RBP31.23■■■□□ 2.59
GTPBP3-227ENST00000602056 BRCA1P38398 1863 aaKnown RBP31.23■■■□□ 2.59
GTPBP3-227ENST00000602056 CEMIPQ8WUJ3 1361 aa31.22■■■□□ 2.59
GTPBP3-227ENST00000602056 HEG1Q9ULI3 1381 aa31.22■■■□□ 2.59
GTPBP3-227ENST00000602056 STARD3NLO95772 234 aa31.22■■■□□ 2.59
GTPBP3-227ENST00000602056 UBR2Q8IWV8 1755 aa31.22■■■□□ 2.59
GTPBP3-227ENST00000602056 PPP2R1AP30153 589 aa31.21■■■□□ 2.59
GTPBP3-227ENST00000602056 CFAP53Q96M91 514 aa31.21■■■□□ 2.59
GTPBP3-227ENST00000602056 VIRMAQ69YN4 1812 aaKnown RBP31.2■■■□□ 2.59
GTPBP3-227ENST00000602056 KCNQ3O43525 872 aa31.2■■■□□ 2.59
GTPBP3-227ENST00000602056 C9orf131Q5VYM1 1079 aa31.19■■■□□ 2.58
GTPBP3-227ENST00000602056 SERPINB2P05120 415 aa31.18■■■□□ 2.58
GTPBP3-227ENST00000602056 HSPA6P17066 643 aa31.17■■■□□ 2.58
GTPBP3-227ENST00000602056 TEX13AQ9BXU3 409 aaPredicted RBP31.15■■■□□ 2.58
GTPBP3-227ENST00000602056 A1BGP04217 495 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 U2AF1L5P0DN76 240 aaPredicted RBP31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 U2AF1Q01081 240 aaKnown RBP eCLIP31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 BICDL1Q6ZP65 573 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 FMNL2Q96PY5 1086 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 NMRK2Q9NPI5 230 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 NUDCQ9Y266 331 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 CARMIL3Q8ND23 1372 aa31.14■■■□□ 2.58
GTPBP3-227ENST00000602056 A0A087WZG4 1122 aa31.13■■■□□ 2.57
GTPBP3-227ENST00000602056 BTBD11A6QL63 1104 aa31.13■■■□□ 2.57
GTPBP3-227ENST00000602056 TBC1D9BQ66K14 1250 aa31.12■■■□□ 2.57
GTPBP3-227ENST00000602056 TBC1D2BQ9UPU7 963 aa31.12■■■□□ 2.57
GTPBP3-227ENST00000602056 NRXN2Q9P2S2 1712 aa31.12■■■□□ 2.57
GTPBP3-227ENST00000602056 SIPA1L3O60292 1781 aaPredicted RBP31.12■■■□□ 2.57
GTPBP3-227ENST00000602056 CEP350Q5VT06 3117 aa31.11■■■□□ 2.57
GTPBP3-227ENST00000602056 ARFGEF1Q9Y6D6 1849 aa31.11■■■□□ 2.57
GTPBP3-227ENST00000602056 IL6STP40189 918 aaPredicted RBP31.1■■■□□ 2.57
GTPBP3-227ENST00000602056 MCM10Q7L590 875 aa31.1■■■□□ 2.57
GTPBP3-227ENST00000602056 ZNF330Q9Y3S2 320 aaPredicted RBP31.1■■■□□ 2.57
GTPBP3-227ENST00000602056 RNF181Q9P0P0 153 aa31.09■■■□□ 2.57
GTPBP3-227ENST00000602056 AFDNP55196 1824 aaKnown RBP31.08■■■□□ 2.57
GTPBP3-227ENST00000602056 PRAMEF22A3QJZ6 481 aa31.08■■■□□ 2.57
GTPBP3-227ENST00000602056 C2CD5Q86YS7 1000 aa31.08■■■□□ 2.57
GTPBP3-227ENST00000602056 USP16Q9Y5T5 823 aa31.08■■■□□ 2.57
GTPBP3-227ENST00000602056 TOMM70O94826 608 aa31.06■■■□□ 2.56
GTPBP3-227ENST00000602056 CAMTA2O94983 1202 aa31.06■■■□□ 2.56
GTPBP3-227ENST00000602056 PRELPP51888 382 aa31.06■■■□□ 2.56
GTPBP3-227ENST00000602056 RASSF7Q02833 373 aa31.06■■■□□ 2.56
GTPBP3-227ENST00000602056 DCTN1Q14203 1278 aa31.06■■■□□ 2.56
GTPBP3-227ENST00000602056 PIP4K2AP48426 406 aaPredicted RBP31.04■■■□□ 2.56
GTPBP3-227ENST00000602056 CCDC24Q8N4L8 307 aa31.04■■■□□ 2.56
GTPBP3-227ENST00000602056 TTLL6Q8N841 843 aa31.04■■■□□ 2.56
GTPBP3-227ENST00000602056 PRR5LQ6MZQ0 368 aa31.03■■■□□ 2.56
GTPBP3-227ENST00000602056 RTF1Q92541 710 aaKnown RBP31.03■■■□□ 2.56
GTPBP3-227ENST00000602056 H0YIN7 160 aa31.02■■■□□ 2.56
GTPBP3-227ENST00000602056 BRIP1Q9BX63 1249 aa31■■■□□ 2.55
GTPBP3-227ENST00000602056 SCN7AQ01118 1682 aa31■■■□□ 2.55
GTPBP3-227ENST00000602056 HTATSF1O43719 755 aaKnown RBP30.99■■■□□ 2.55
GTPBP3-227ENST00000602056 SNRPA1P09661 255 aaKnown RBP30.99■■■□□ 2.55
GTPBP3-227ENST00000602056 DZIP3Q86Y13 1208 aaKnown RBP30.99■■■□□ 2.55
GTPBP3-227ENST00000602056 NFKBIEO00221 500 aa30.97■■■□□ 2.55
GTPBP3-227ENST00000602056 SETDB2Q96T68 719 aa30.96■■■□□ 2.55
GTPBP3-227ENST00000602056 KDM2BQ8NHM5 1336 aa30.96■■■□□ 2.55
GTPBP3-227ENST00000602056 NBPF26B4DH59 902 aa30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 LMNB1P20700 586 aa30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 PDE6BP35913 854 aa30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 NBPF10Q6P3W6 841 aaKnown RBP30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 NPM2Q86SE8 214 aaKnown RBP30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 NBPF15Q8N660 670 aa30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 RBM46Q8TBY0 533 aaKnown RBP30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 ZNF622Q969S3 477 aaKnown RBP eCLIP30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 RRAGCQ9HB90 399 aa30.95■■■□□ 2.55
GTPBP3-227ENST00000602056 DLEC1Q9Y238 1755 aa30.94■■■□□ 2.54
GTPBP3-227ENST00000602056 MIS18AQ9NYP9 233 aa30.94■■■□□ 2.54
GTPBP3-227ENST00000602056 APLP1P51693 650 aa30.93■■■□□ 2.54
GTPBP3-227ENST00000602056 TAF7Q15545 349 aaPredicted RBP30.93■■■□□ 2.54
GTPBP3-227ENST00000602056 CNBD1Q8NA66 436 aa30.93■■■□□ 2.54
GTPBP3-227ENST00000602056 PLEKHF1Q96S99 279 aa30.93■■■□□ 2.54
GTPBP3-227ENST00000602056 PDZRN3Q9UPQ7 1066 aa30.92■■■□□ 2.54
GTPBP3-227ENST00000602056 SBF1O95248 1867 aa30.92■■■□□ 2.54
GTPBP3-227ENST00000602056 ANKRD31Q8N7Z5 1873 aa30.92■■■□□ 2.54
GTPBP3-227ENST00000602056 ZC3H4Q9UPT8 1303 aaKnown RBP30.92■■■□□ 2.54
GTPBP3-227ENST00000602056 C21orf2O43822 256 aa30.9■■■□□ 2.54
GTPBP3-227ENST00000602056 ZNF219Q9P2Y4 722 aaPredicted RBP30.9■■■□□ 2.54
GTPBP3-227ENST00000602056 CLEC4GQ6UXB4 293 aa30.89■■■□□ 2.54
GTPBP3-227ENST00000602056 C16orf71Q8IYS4 520 aaPredicted RBP30.89■■■□□ 2.54
GTPBP3-227ENST00000602056 DNAJC5GQ8N7S2 189 aa30.89■■■□□ 2.54
GTPBP3-227ENST00000602056 SRGNP10124 158 aa30.87■■■□□ 2.53
GTPBP3-227ENST00000602056 GLTPD2A6NH11 291 aa30.86■■■□□ 2.53
GTPBP3-227ENST00000602056 ST5P78524 1137 aa30.86■■■□□ 2.53
GTPBP3-227ENST00000602056 THUMPD2Q9BTF0 503 aaKnown RBP30.86■■■□□ 2.53
GTPBP3-227ENST00000602056 COL11A2P13942 1736 aaPredicted RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms