RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 WDR90Q96KV7 1748 aa18.23■□□□□ 0.51
SUPT5H-220ENST00000601978 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
SUPT5H-220ENST00000601978 NARFQ9UHQ1 456 aa18.23■□□□□ 0.51
SUPT5H-220ENST00000601978 MRC1P22897 1456 aa18.22■□□□□ 0.51
SUPT5H-220ENST00000601978 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
SUPT5H-220ENST00000601978 NFIXQ14938 502 aa18.22■□□□□ 0.51
SUPT5H-220ENST00000601978 RRAGCQ9HB90 399 aa18.22■□□□□ 0.51
SUPT5H-220ENST00000601978 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
SUPT5H-220ENST00000601978 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
SUPT5H-220ENST00000601978 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 LMNB1P20700 586 aa18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 NRXN2Q9P2S2 1712 aa18.19■□□□□ 0.5
SUPT5H-220ENST00000601978 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SUPT5H-220ENST00000601978 SERPINB2P05120 415 aa18.18■□□□□ 0.5
SUPT5H-220ENST00000601978 HTRA3P83110 453 aa18.18■□□□□ 0.5
SUPT5H-220ENST00000601978 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
SUPT5H-220ENST00000601978 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
SUPT5H-220ENST00000601978 AFDNP55196 1824 aaKnown RBP18.17■□□□□ 0.5
SUPT5H-220ENST00000601978 GLTPD2A6NH11 291 aa18.17■□□□□ 0.5
SUPT5H-220ENST00000601978 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
SUPT5H-220ENST00000601978 PRELPP51888 382 aa18.16■□□□□ 0.5
SUPT5H-220ENST00000601978 RASSF7Q02833 373 aa18.16■□□□□ 0.5
SUPT5H-220ENST00000601978 HMOX1P09601 288 aa18.15■□□□□ 0.5
SUPT5H-220ENST00000601978 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
SUPT5H-220ENST00000601978 STARD3NLO95772 234 aa18.14■□□□□ 0.49
SUPT5H-220ENST00000601978 EIF5P55010 431 aaKnown RBP18.14■□□□□ 0.49
SUPT5H-220ENST00000601978 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
SUPT5H-220ENST00000601978 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
SUPT5H-220ENST00000601978 H0YIN7 160 aa18.13■□□□□ 0.49
SUPT5H-220ENST00000601978 C2CD5Q86YS7 1000 aa18.13■□□□□ 0.49
SUPT5H-220ENST00000601978 PDZRN3Q9UPQ7 1066 aa18.13■□□□□ 0.49
SUPT5H-220ENST00000601978 A0A087WZG4 1122 aa18.12■□□□□ 0.49
SUPT5H-220ENST00000601978 NFKBIEO00221 500 aa18.12■□□□□ 0.49
SUPT5H-220ENST00000601978 COL13A1Q5TAT6 717 aaPredicted RBP18.12■□□□□ 0.49
SUPT5H-220ENST00000601978 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
SUPT5H-220ENST00000601978 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
SUPT5H-220ENST00000601978 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
SUPT5H-220ENST00000601978 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
SUPT5H-220ENST00000601978 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
SUPT5H-220ENST00000601978 UBR2Q8IWV8 1755 aa18.11■□□□□ 0.49
SUPT5H-220ENST00000601978 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
SUPT5H-220ENST00000601978 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
SUPT5H-220ENST00000601978 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
SUPT5H-220ENST00000601978 POTECB2RU33 542 aa18.09■□□□□ 0.49
SUPT5H-220ENST00000601978 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
SUPT5H-220ENST00000601978 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
SUPT5H-220ENST00000601978 PDE6BP35913 854 aa18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
SUPT5H-220ENST00000601978 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
SUPT5H-220ENST00000601978 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
SUPT5H-220ENST00000601978 LTBP3Q9NS15 1303 aa18.06■□□□□ 0.48
SUPT5H-220ENST00000601978 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
SUPT5H-220ENST00000601978 ZNF622Q969S3 477 aaKnown RBP eCLIP18.06■□□□□ 0.485e-11■■■□□ 18
SUPT5H-220ENST00000601978 GNAT3A8MTJ3 354 aa18.05■□□□□ 0.48
SUPT5H-220ENST00000601978 TEFQ10587 303 aa18.05■□□□□ 0.48
SUPT5H-220ENST00000601978 PRR5LQ6MZQ0 368 aa18.05■□□□□ 0.48
SUPT5H-220ENST00000601978 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
SUPT5H-220ENST00000601978 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
SUPT5H-220ENST00000601978 TIAM2Q8IVF5 1701 aa18.04■□□□□ 0.48
SUPT5H-220ENST00000601978 C21orf2O43822 256 aa18.04■□□□□ 0.48
SUPT5H-220ENST00000601978 ERFEQ4G0M1 354 aa18.04■□□□□ 0.48
SUPT5H-220ENST00000601978 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
SUPT5H-220ENST00000601978 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
SUPT5H-220ENST00000601978 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
SUPT5H-220ENST00000601978 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
SUPT5H-220ENST00000601978 DICER1Q9UPY3 1922 aaKnown RBP18.03■□□□□ 0.48
SUPT5H-220ENST00000601978 FER1L6Q2WGJ9 1857 aa18.03■□□□□ 0.48
SUPT5H-220ENST00000601978 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
SUPT5H-220ENST00000601978 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
SUPT5H-220ENST00000601978 STYK1Q6J9G0 422 aa18.02■□□□□ 0.48
SUPT5H-220ENST00000601978 CNKSR1Q969H4 720 aa18.02■□□□□ 0.48
SUPT5H-220ENST00000601978 SETDB2Q96T68 719 aa18.02■□□□□ 0.48
SUPT5H-220ENST00000601978 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
SUPT5H-220ENST00000601978 CEMIPQ8WUJ3 1361 aa18.02■□□□□ 0.47
SUPT5H-220ENST00000601978 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
SUPT5H-220ENST00000601978 A1BGP04217 495 aa18.01■□□□□ 0.47
SUPT5H-220ENST00000601978 HSPA1AP0DMV8 641 aaKnown RBP18.01■□□□□ 0.47
SUPT5H-220ENST00000601978 HSPA1BP0DMV9 641 aaKnown RBP18.01■□□□□ 0.47
SUPT5H-220ENST00000601978 SIPA1L3O60292 1781 aaPredicted RBP18.01■□□□□ 0.47
SUPT5H-220ENST00000601978 SRGNP10124 158 aa18■□□□□ 0.47
SUPT5H-220ENST00000601978 SOGA3Q5TF21 947 aa18■□□□□ 0.47
SUPT5H-220ENST00000601978 CNBD1Q8NA66 436 aa18■□□□□ 0.47
SUPT5H-220ENST00000601978 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
SUPT5H-220ENST00000601978 COL11A2P13942 1736 aaPredicted RBP17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 CCDC24Q8N4L8 307 aa17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 MASTLQ96GX5 879 aa17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
SUPT5H-220ENST00000601978 ST5P78524 1137 aa17.98■□□□□ 0.47
SUPT5H-220ENST00000601978 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms