RNA–Protein interactions for RNA: ENST00000601870.1

AC008878.2-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AC008878.2, Length 942 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.2-201ENST00000601870 TM4SF1P30408 202 aa23.67■■□□□ 1.38
AC008878.2-201ENST00000601870 APLP1P51693 650 aa23.67■■□□□ 1.38
AC008878.2-201ENST00000601870 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
AC008878.2-201ENST00000601870 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 HTRA3P83110 453 aa23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 DALRD3Q5D0E6 543 aaKnown RBP23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 AKAP4Q5JQC9 854 aa23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 AMER1Q5JTC6 1135 aaPredicted RBP23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 SLC52A2Q9HAB3 445 aa23.66■■□□□ 1.38
AC008878.2-201ENST00000601870 HMOX1P09601 288 aa23.65■■□□□ 1.38
AC008878.2-201ENST00000601870 COL11A2P13942 1736 aaPredicted RBP23.64■■□□□ 1.38
AC008878.2-201ENST00000601870 CYP19A1P11511 503 aaPredicted RBP23.64■■□□□ 1.37
AC008878.2-201ENST00000601870 RNF181Q9P0P0 153 aa23.64■■□□□ 1.37
AC008878.2-201ENST00000601870 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
AC008878.2-201ENST00000601870 BCL2L12Q9HB09 334 aa23.63■■□□□ 1.37
AC008878.2-201ENST00000601870 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
AC008878.2-201ENST00000601870 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
AC008878.2-201ENST00000601870 RNMTO43148 476 aaKnown RBP23.62■■□□□ 1.37
AC008878.2-201ENST00000601870 SCN7AQ01118 1682 aa23.62■■□□□ 1.37
AC008878.2-201ENST00000601870 COL15A1P39059 1388 aa23.62■■□□□ 1.37
AC008878.2-201ENST00000601870 PRELPP51888 382 aa23.61■■□□□ 1.37
AC008878.2-201ENST00000601870 RASSF7Q02833 373 aa23.61■■□□□ 1.37
AC008878.2-201ENST00000601870 NFIXQ14938 502 aa23.61■■□□□ 1.37
AC008878.2-201ENST00000601870 CARMIL3Q8ND23 1372 aa23.61■■□□□ 1.37
AC008878.2-201ENST00000601870 ZPR1O75312 459 aa23.6■■□□□ 1.37
AC008878.2-201ENST00000601870 MTHFSDQ2M296 383 aaKnown RBP23.6■■□□□ 1.37
AC008878.2-201ENST00000601870 RBM46Q8TBY0 533 aaKnown RBP23.6■■□□□ 1.37
AC008878.2-201ENST00000601870 FER1L6Q2WGJ9 1857 aa23.59■■□□□ 1.37
AC008878.2-201ENST00000601870 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
AC008878.2-201ENST00000601870 RRAGCQ9HB90 399 aa23.58■■□□□ 1.37
AC008878.2-201ENST00000601870 NARFQ9UHQ1 456 aa23.58■■□□□ 1.37
AC008878.2-201ENST00000601870 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
AC008878.2-201ENST00000601870 KDM2BQ8NHM5 1336 aa23.55■■□□□ 1.36
AC008878.2-201ENST00000601870 BCORQ6W2J9 1755 aa23.55■■□□□ 1.36
AC008878.2-201ENST00000601870 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
AC008878.2-201ENST00000601870 C16orf71Q8IYS4 520 aaPredicted RBP23.54■■□□□ 1.36
AC008878.2-201ENST00000601870 SERPINB2P05120 415 aa23.53■■□□□ 1.36
AC008878.2-201ENST00000601870 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
AC008878.2-201ENST00000601870 SLX4Q8IY92 1834 aa23.52■■□□□ 1.36
AC008878.2-201ENST00000601870 PER1O15534 1290 aaPredicted RBP23.52■■□□□ 1.36
AC008878.2-201ENST00000601870 ARFGEF2Q9Y6D5 1785 aa23.52■■□□□ 1.36
AC008878.2-201ENST00000601870 FSTL1Q12841 308 aa23.51■■□□□ 1.35
AC008878.2-201ENST00000601870 DIAPH1O60610 1272 aaKnown RBP23.5■■□□□ 1.35
AC008878.2-201ENST00000601870 BICDL1Q6ZP65 573 aa23.5■■□□□ 1.35
AC008878.2-201ENST00000601870 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
AC008878.2-201ENST00000601870 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
AC008878.2-201ENST00000601870 KLRG1Q96E93 195 aa23.5■■□□□ 1.35
AC008878.2-201ENST00000601870 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
AC008878.2-201ENST00000601870 CCDC24Q8N4L8 307 aa23.49■■□□□ 1.35
AC008878.2-201ENST00000601870 NFKBIEO00221 500 aa23.48■■□□□ 1.35
AC008878.2-201ENST00000601870 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
AC008878.2-201ENST00000601870 TBC1D9BQ66K14 1250 aa23.47■■□□□ 1.35
AC008878.2-201ENST00000601870 TTLL6Q8N841 843 aa23.47■■□□□ 1.35
AC008878.2-201ENST00000601870 IL17REQ8NFR9 667 aa23.47■■□□□ 1.35
AC008878.2-201ENST00000601870 ZNF496Q96IT1 587 aaPredicted RBP23.47■■□□□ 1.35
AC008878.2-201ENST00000601870 LMNB1P20700 586 aa23.46■■□□□ 1.35
AC008878.2-201ENST00000601870 JMYQ8N9B5 988 aa23.46■■□□□ 1.35
AC008878.2-201ENST00000601870 HEG1Q9ULI3 1381 aa23.45■■□□□ 1.34
AC008878.2-201ENST00000601870 ZC3H4Q9UPT8 1303 aaKnown RBP23.44■■□□□ 1.34
AC008878.2-201ENST00000601870 GLTPD2A6NH11 291 aa23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 COL13A1Q5TAT6 717 aaPredicted RBP23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 SMC1BQ8NDV3 1235 aa23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 ZNF219Q9P2Y4 722 aaPredicted RBP23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 TBC1D2BQ9UPU7 963 aa23.43■■□□□ 1.34
AC008878.2-201ENST00000601870 POTECB2RU33 542 aa23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 H0YIN7 160 aa23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 STARD3NLO95772 234 aa23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 ZNF790Q6PG37 636 aa23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 ZNF330Q9Y3S2 320 aaPredicted RBP23.42■■□□□ 1.34
AC008878.2-201ENST00000601870 KCNQ3O43525 872 aa23.41■■□□□ 1.34
AC008878.2-201ENST00000601870 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
AC008878.2-201ENST00000601870 A1BGP04217 495 aa23.4■■□□□ 1.34
AC008878.2-201ENST00000601870 GNAT3A8MTJ3 354 aa23.39■■□□□ 1.33
AC008878.2-201ENST00000601870 VEGFAP15692 232 aaPredicted RBP23.39■■□□□ 1.33
AC008878.2-201ENST00000601870 TEFQ10587 303 aa23.39■■□□□ 1.33
AC008878.2-201ENST00000601870 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
AC008878.2-201ENST00000601870 DLG5Q8TDM6 1919 aa23.39■■□□□ 1.33
AC008878.2-201ENST00000601870 A0A087WZG4 1122 aa23.38■■□□□ 1.33
AC008878.2-201ENST00000601870 C21orf2O43822 256 aa23.38■■□□□ 1.33
AC008878.2-201ENST00000601870 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
AC008878.2-201ENST00000601870 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
AC008878.2-201ENST00000601870 CEMIPQ8WUJ3 1361 aa23.38■■□□□ 1.33
AC008878.2-201ENST00000601870 CAMTA2O94983 1202 aa23.36■■□□□ 1.33
AC008878.2-201ENST00000601870 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
AC008878.2-201ENST00000601870 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
AC008878.2-201ENST00000601870 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
AC008878.2-201ENST00000601870 IL6STP40189 918 aaPredicted RBP23.35■■□□□ 1.33
AC008878.2-201ENST00000601870 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
AC008878.2-201ENST00000601870 FMNL2Q96PY5 1086 aa23.34■■□□□ 1.33
AC008878.2-201ENST00000601870 LAMB4A4D0S4 1761 aa23.33■■□□□ 1.33
AC008878.2-201ENST00000601870 PDE6BP35913 854 aa23.33■■□□□ 1.33
AC008878.2-201ENST00000601870 SCN4AP35499 1836 aa23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 NUP98P52948 1817 aa23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
AC008878.2-201ENST00000601870 USP16Q9Y5T5 823 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms