RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
IRF3-229ENST00000601373 WNK3Q9BYP7 1800 aa17.37■□□□□ 0.37
IRF3-229ENST00000601373 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
IRF3-229ENST00000601373 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
IRF3-229ENST00000601373 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
IRF3-229ENST00000601373 FMNL2Q96PY5 1086 aa17.37■□□□□ 0.37
IRF3-229ENST00000601373 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
IRF3-229ENST00000601373 DDB1Q16531 1140 aa17.36■□□□□ 0.37
IRF3-229ENST00000601373 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
IRF3-229ENST00000601373 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
IRF3-229ENST00000601373 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
IRF3-229ENST00000601373 FLIIQ13045 1269 aa17.35■□□□□ 0.37
IRF3-229ENST00000601373 CENPQQ7L2Z9 268 aaPredicted RBP17.35■□□□□ 0.37
IRF3-229ENST00000601373 TMOD3Q9NYL9 352 aa17.35■□□□□ 0.37
IRF3-229ENST00000601373 G2E3Q7L622 706 aa17.34■□□□□ 0.37
IRF3-229ENST00000601373 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
IRF3-229ENST00000601373 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
IRF3-229ENST00000601373 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
IRF3-229ENST00000601373 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
IRF3-229ENST00000601373 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
IRF3-229ENST00000601373 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
IRF3-229ENST00000601373 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
IRF3-229ENST00000601373 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
IRF3-229ENST00000601373 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
IRF3-229ENST00000601373 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
IRF3-229ENST00000601373 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
IRF3-229ENST00000601373 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
IRF3-229ENST00000601373 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
IRF3-229ENST00000601373 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
IRF3-229ENST00000601373 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
IRF3-229ENST00000601373 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
IRF3-229ENST00000601373 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
IRF3-229ENST00000601373 APBA3O96018 575 aa17.29■□□□□ 0.36
IRF3-229ENST00000601373 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
IRF3-229ENST00000601373 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
IRF3-229ENST00000601373 TOGARAM1Q9Y4F4 1720 aa17.28■□□□□ 0.36
IRF3-229ENST00000601373 TRIM37O94972 964 aa17.28■□□□□ 0.36
IRF3-229ENST00000601373 PIGBQ92521 554 aa17.28■□□□□ 0.36
IRF3-229ENST00000601373 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
IRF3-229ENST00000601373 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
IRF3-229ENST00000601373 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
IRF3-229ENST00000601373 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
IRF3-229ENST00000601373 YY1P25490 414 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
IRF3-229ENST00000601373 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
IRF3-229ENST00000601373 BCL9O00512 1426 aa17.27■□□□□ 0.35
IRF3-229ENST00000601373 UBR2Q8IWV8 1755 aa17.27■□□□□ 0.35
IRF3-229ENST00000601373 F6X3S4 739 aa17.26■□□□□ 0.35
IRF3-229ENST00000601373 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
IRF3-229ENST00000601373 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
IRF3-229ENST00000601373 ITGB4P16144 1822 aa17.26■□□□□ 0.35
IRF3-229ENST00000601373 IGHDP01880 384 aa17.25■□□□□ 0.35
IRF3-229ENST00000601373 PDIA6Q15084 440 aa17.25■□□□□ 0.35
IRF3-229ENST00000601373 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
IRF3-229ENST00000601373 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
IRF3-229ENST00000601373 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
IRF3-229ENST00000601373 C5P01031 1676 aa17.24■□□□□ 0.35
IRF3-229ENST00000601373 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
IRF3-229ENST00000601373 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
IRF3-229ENST00000601373 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 PTCD1O75127 700 aaKnown RBP17.23■□□□□ 0.35
IRF3-229ENST00000601373 ANXA1P04083 346 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
IRF3-229ENST00000601373 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
IRF3-229ENST00000601373 GNAI3P08754 354 aa17.22■□□□□ 0.35
IRF3-229ENST00000601373 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
IRF3-229ENST00000601373 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
IRF3-229ENST00000601373 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
IRF3-229ENST00000601373 SPON1Q9HCB6 807 aa17.22■□□□□ 0.35
IRF3-229ENST00000601373 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
IRF3-229ENST00000601373 ALDH1L1O75891 902 aa17.2■□□□□ 0.34
IRF3-229ENST00000601373 STARD3NLO95772 234 aa17.2■□□□□ 0.34
IRF3-229ENST00000601373 MYL6BP14649 208 aa17.2■□□□□ 0.34
IRF3-229ENST00000601373 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
IRF3-229ENST00000601373 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
IRF3-229ENST00000601373 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
IRF3-229ENST00000601373 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
IRF3-229ENST00000601373 ADCY9O60503 1353 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 KCNQ2O43526 872 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
IRF3-229ENST00000601373 MEIS3Q99687 375 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 HDAC5Q9UQL6 1122 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 MAP3K2Q9Y2U5 619 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 RREB1Q92766 1687 aa17.19■□□□□ 0.34
IRF3-229ENST00000601373 IBTKQ9P2D0 1353 aaPredicted RBP17.18■□□□□ 0.34
IRF3-229ENST00000601373 GNAI2P04899 355 aa17.18■□□□□ 0.34
IRF3-229ENST00000601373 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
IRF3-229ENST00000601373 ANKRD13DQ6ZTN6 518 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms