RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
IRF3-225ENST00000600022 ZBTB1Q9Y2K1 713 aa18.55■□□□□ 0.56
IRF3-225ENST00000600022 HTRA3P83110 453 aa18.54■□□□□ 0.56
IRF3-225ENST00000600022 NFIXQ14938 502 aa18.54■□□□□ 0.56
IRF3-225ENST00000600022 ZPR1O75312 459 aa18.53■□□□□ 0.56
IRF3-225ENST00000600022 KCPQ6ZWJ8 1503 aa18.53■□□□□ 0.56
IRF3-225ENST00000600022 PRELPP51888 382 aa18.52■□□□□ 0.56
IRF3-225ENST00000600022 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
IRF3-225ENST00000600022 RNF181Q9P0P0 153 aa18.52■□□□□ 0.56
IRF3-225ENST00000600022 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
IRF3-225ENST00000600022 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
IRF3-225ENST00000600022 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
IRF3-225ENST00000600022 RASSF7Q02833 373 aa18.5■□□□□ 0.55
IRF3-225ENST00000600022 RRAGCQ9HB90 399 aa18.5■□□□□ 0.55
IRF3-225ENST00000600022 SERPINB2P05120 415 aa18.49■□□□□ 0.55
IRF3-225ENST00000600022 APLP1P51693 650 aa18.49■□□□□ 0.55
IRF3-225ENST00000600022 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
IRF3-225ENST00000600022 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
IRF3-225ENST00000600022 PCNTO95613 3336 aa18.48■□□□□ 0.55
IRF3-225ENST00000600022 MRC1P22897 1456 aa18.48■□□□□ 0.55
IRF3-225ENST00000600022 COL15A1P39059 1388 aa18.48■□□□□ 0.55
IRF3-225ENST00000600022 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
IRF3-225ENST00000600022 CCDC24Q8N4L8 307 aa18.48■□□□□ 0.55
IRF3-225ENST00000600022 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
IRF3-225ENST00000600022 ZNF496Q96IT1 587 aaPredicted RBP18.46■□□□□ 0.55
IRF3-225ENST00000600022 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
IRF3-225ENST00000600022 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
IRF3-225ENST00000600022 KCNQ3O43525 872 aa18.45■□□□□ 0.54
IRF3-225ENST00000600022 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
IRF3-225ENST00000600022 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
IRF3-225ENST00000600022 RBM46Q8TBY0 533 aaKnown RBP18.45■□□□□ 0.54
IRF3-225ENST00000600022 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
IRF3-225ENST00000600022 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
IRF3-225ENST00000600022 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
IRF3-225ENST00000600022 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
IRF3-225ENST00000600022 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
IRF3-225ENST00000600022 SBF1O95248 1867 aa18.43■□□□□ 0.54
IRF3-225ENST00000600022 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
IRF3-225ENST00000600022 A1BGP04217 495 aa18.42■□□□□ 0.54
IRF3-225ENST00000600022 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
IRF3-225ENST00000600022 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
IRF3-225ENST00000600022 NRXN2Q9P2S2 1712 aa18.41■□□□□ 0.54
IRF3-225ENST00000600022 NFKBIEO00221 500 aa18.41■□□□□ 0.54
IRF3-225ENST00000600022 ZNF790Q6PG37 636 aa18.41■□□□□ 0.54
IRF3-225ENST00000600022 TTC5Q8N0Z6 440 aa18.41■□□□□ 0.54
IRF3-225ENST00000600022 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
IRF3-225ENST00000600022 ZNF219Q9P2Y4 722 aaPredicted RBP18.41■□□□□ 0.54
IRF3-225ENST00000600022 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
IRF3-225ENST00000600022 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
IRF3-225ENST00000600022 STARD3NLO95772 234 aa18.4■□□□□ 0.54
IRF3-225ENST00000600022 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
IRF3-225ENST00000600022 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
IRF3-225ENST00000600022 PRAMEF22A3QJZ6 481 aa18.39■□□□□ 0.53
IRF3-225ENST00000600022 H0YIN7 160 aa18.39■□□□□ 0.53
IRF3-225ENST00000600022 LMNB1P20700 586 aa18.39■□□□□ 0.53
IRF3-225ENST00000600022 TEFQ10587 303 aa18.39■□□□□ 0.53
IRF3-225ENST00000600022 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
IRF3-225ENST00000600022 FSTL1Q12841 308 aa18.38■□□□□ 0.53
IRF3-225ENST00000600022 POTECB2RU33 542 aa18.37■□□□□ 0.53
IRF3-225ENST00000600022 PRR5LQ6MZQ0 368 aa18.37■□□□□ 0.53
IRF3-225ENST00000600022 ZNF622Q969S3 477 aaKnown RBP eCLIP18.37■□□□□ 0.53
IRF3-225ENST00000600022 KLRG1Q96E93 195 aa18.37■□□□□ 0.53
IRF3-225ENST00000600022 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
IRF3-225ENST00000600022 C21orf2O43822 256 aa18.36■□□□□ 0.53
IRF3-225ENST00000600022 WDR90Q96KV7 1748 aa18.36■□□□□ 0.53
IRF3-225ENST00000600022 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
IRF3-225ENST00000600022 A0A087WZG4 1122 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 GAS2L2Q8NHY3 880 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
IRF3-225ENST00000600022 IL6STP40189 918 aaPredicted RBP18.34■□□□□ 0.53
IRF3-225ENST00000600022 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
IRF3-225ENST00000600022 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
IRF3-225ENST00000600022 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
IRF3-225ENST00000600022 NPC1L1Q9UHC9 1359 aa18.33■□□□□ 0.53
IRF3-225ENST00000600022 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.53
IRF3-225ENST00000600022 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
IRF3-225ENST00000600022 VEGFAP15692 232 aaPredicted RBP18.33■□□□□ 0.52
IRF3-225ENST00000600022 COL13A1Q5TAT6 717 aaPredicted RBP18.33■□□□□ 0.52
IRF3-225ENST00000600022 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.52
IRF3-225ENST00000600022 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
IRF3-225ENST00000600022 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
IRF3-225ENST00000600022 MCM10Q7L590 875 aa18.32■□□□□ 0.52
IRF3-225ENST00000600022 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
IRF3-225ENST00000600022 SMC1BQ8NDV3 1235 aa18.32■□□□□ 0.52
IRF3-225ENST00000600022 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
IRF3-225ENST00000600022 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
IRF3-225ENST00000600022 PDE6BP35913 854 aa18.3■□□□□ 0.52
IRF3-225ENST00000600022 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
IRF3-225ENST00000600022 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
IRF3-225ENST00000600022 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
IRF3-225ENST00000600022 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
IRF3-225ENST00000600022 ZC3H4Q9UPT8 1303 aaKnown RBP18.29■□□□□ 0.52
IRF3-225ENST00000600022 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
IRF3-225ENST00000600022 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
IRF3-225ENST00000600022 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
IRF3-225ENST00000600022 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
IRF3-225ENST00000600022 POTEIP0CG38 1075 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms