RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF1-216ENST00000598587 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
ARHGEF1-216ENST00000598587 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 RFC4P35249 363 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 COL15A1P39059 1388 aa15.75■□□□□ 0.11
ARHGEF1-216ENST00000598587 KCNQ3O43525 872 aa15.74■□□□□ 0.11
ARHGEF1-216ENST00000598587 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
ARHGEF1-216ENST00000598587 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
ARHGEF1-216ENST00000598587 MIS18AQ9NYP9 233 aa15.73■□□□□ 0.11
ARHGEF1-216ENST00000598587 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 A0A087WZG4 1122 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 PTGER2P43116 358 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 NGEFQ8N5V2 710 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
ARHGEF1-216ENST00000598587 ZPR1O75312 459 aa15.71■□□□□ 0.11
ARHGEF1-216ENST00000598587 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
ARHGEF1-216ENST00000598587 GNAI1P63096 354 aa15.71■□□□□ 0.11
ARHGEF1-216ENST00000598587 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
ARHGEF1-216ENST00000598587 USP42Q9H9J4 1324 aaKnown RBP15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 IL6STP40189 918 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 MSL1Q68DK7 614 aa15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 ARXQ96QS3 562 aa15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 SGIP1Q9BQI5 828 aa15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
ARHGEF1-216ENST00000598587 SRCAPQ6ZRS2 3230 aa15.69■□□□□ 0.1
ARHGEF1-216ENST00000598587 CHL1O00533 1208 aa15.69■□□□□ 0.1
ARHGEF1-216ENST00000598587 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF1-216ENST00000598587 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF1-216ENST00000598587 KIF13BQ9NQT8 1826 aa15.68■□□□□ 0.1
ARHGEF1-216ENST00000598587 SMIM5Q71RC9 77 aa15.68■□□□□ 0.1
ARHGEF1-216ENST00000598587 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
ARHGEF1-216ENST00000598587 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
ARHGEF1-216ENST00000598587 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
ARHGEF1-216ENST00000598587 NARFQ9UHQ1 456 aa15.67■□□□□ 0.1
ARHGEF1-216ENST00000598587 IL16Q14005 1332 aa15.67■□□□□ 0.1
ARHGEF1-216ENST00000598587 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
ARHGEF1-216ENST00000598587 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 A1BGP04217 495 aa15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 HOXB7P09629 217 aa15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 GYS1P13807 737 aa15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 NUP98P52948 1817 aa15.66■□□□□ 0.1
ARHGEF1-216ENST00000598587 CHMP4AQ9BY43 222 aa15.65■□□□□ 0.1
ARHGEF1-216ENST00000598587 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
ARHGEF1-216ENST00000598587 ANKRD36CQ5JPF3 1778 aa15.64■□□□□ 0.1
ARHGEF1-216ENST00000598587 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 MMP10P09238 476 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 USPL1Q5W0Q7 1092 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 KLHL34Q8N239 644 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 FHDC1Q9C0D6 1143 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 NRXN2Q9P2S2 1712 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 PARP3Q9Y6F1 533 aa15.64■□□□□ 0.09
ARHGEF1-216ENST00000598587 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
ARHGEF1-216ENST00000598587 DZIP3Q86Y13 1208 aaKnown RBP15.63■□□□□ 0.09
ARHGEF1-216ENST00000598587 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
ARHGEF1-216ENST00000598587 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
ARHGEF1-216ENST00000598587 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
ARHGEF1-216ENST00000598587 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF1-216ENST00000598587 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 RGL2O15211 777 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 FKBP8Q14318 412 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 HDGFL1Q5TGJ6 251 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 KIF6Q6ZMV9 814 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 MIER1Q8N108 512 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
ARHGEF1-216ENST00000598587 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 MYL6BP14649 208 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 SYT17Q9BSW7 474 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
ARHGEF1-216ENST00000598587 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 DUSP27Q5VZP5 1158 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 ARFGEF2Q9Y6D5 1785 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 C10orf71Q711Q0 1435 aa15.59■□□□□ 0.09
ARHGEF1-216ENST00000598587 KIAA1551Q9HCM1 1747 aa15.58■□□□□ 0.08
ARHGEF1-216ENST00000598587 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
ARHGEF1-216ENST00000598587 BRCA1P38398 1863 aaKnown RBP15.58■□□□□ 0.08
ARHGEF1-216ENST00000598587 TM4SF1P30408 202 aa15.57■□□□□ 0.08
ARHGEF1-216ENST00000598587 KRT24Q2M2I5 525 aa15.57■□□□□ 0.08
ARHGEF1-216ENST00000598587 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
ARHGEF1-216ENST00000598587 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
ARHGEF1-216ENST00000598587 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
ARHGEF1-216ENST00000598587 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms