RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 CCDC87Q9NVE4 849 aa23.48■■□□□ 1.35
GTF2F1-205ENST00000595047 RC3H1Q5TC82 1133 aaKnown RBP23.47■■□□□ 1.35
GTF2F1-205ENST00000595047 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
GTF2F1-205ENST00000595047 INTS5Q6P9B9 1019 aaKnown RBP23.46■■□□□ 1.35
GTF2F1-205ENST00000595047 AK7Q96M32 723 aa23.46■■□□□ 1.35
GTF2F1-205ENST00000595047 CNTNAP4Q9C0A0 1308 aa23.46■■□□□ 1.35
GTF2F1-205ENST00000595047 LY75O60449 1722 aa23.45■■□□□ 1.35
GTF2F1-205ENST00000595047 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
GTF2F1-205ENST00000595047 ZNF428Q96B54 188 aa23.45■■□□□ 1.34
GTF2F1-205ENST00000595047 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
GTF2F1-205ENST00000595047 ERBB4Q15303 1308 aa23.45■■□□□ 1.34
GTF2F1-205ENST00000595047 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
GTF2F1-205ENST00000595047 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
GTF2F1-205ENST00000595047 DBF4Q9UBU7 674 aaPredicted RBP23.44■■□□□ 1.34
GTF2F1-205ENST00000595047 ZBTB1Q9Y2K1 713 aa23.44■■□□□ 1.34
GTF2F1-205ENST00000595047 DDX21Q9NR30 783 aaKnown RBP eCLIP23.43■■□□□ 1.34
GTF2F1-205ENST00000595047 NBPF26B4DH59 902 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 GNPATO15228 680 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 MYL6BP14649 208 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 NBPF14Q5TI25 921 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 NBPF10Q6P3W6 841 aaKnown RBP23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 NBPF15Q8N660 670 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 ZNF831Q5JPB2 1677 aa23.42■■□□□ 1.34
GTF2F1-205ENST00000595047 ANXA1P04083 346 aa23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 PDIA6Q15084 440 aa23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 STK32BQ9NY57 414 aa23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 ZNF330Q9Y3S2 320 aaPredicted RBP23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 TJP1Q07157 1748 aa23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
GTF2F1-205ENST00000595047 RPS6KA4O75676 772 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 RARSP54136 660 aaKnown RBP23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 PROSER3Q2NL68 480 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 ALDH1L2Q3SY69 923 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 SSH1Q8WYL5 1049 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 TFCP2L1Q9NZI6 479 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 RTCBQ9Y3I0 505 aaKnown RBP23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 HYPKQ9NX55 129 aa23.4■■□□□ 1.34
GTF2F1-205ENST00000595047 C5P01031 1676 aa23.39■■□□□ 1.34
GTF2F1-205ENST00000595047 CICQ96RK0 1608 aaPredicted RBP23.39■■□□□ 1.34
GTF2F1-205ENST00000595047 IL6STP40189 918 aaPredicted RBP23.39■■□□□ 1.33
GTF2F1-205ENST00000595047 BCL2L13Q9BXK5 485 aa23.39■■□□□ 1.33
GTF2F1-205ENST00000595047 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
GTF2F1-205ENST00000595047 EIF5P55010 431 aaKnown RBP23.38■■□□□ 1.33
GTF2F1-205ENST00000595047 SLC15A2Q16348 729 aa23.38■■□□□ 1.33
GTF2F1-205ENST00000595047 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
GTF2F1-205ENST00000595047 RCAN3Q9UKA8 241 aa23.38■■□□□ 1.33
GTF2F1-205ENST00000595047 SOCS7O14512 581 aa23.37■■□□□ 1.33
GTF2F1-205ENST00000595047 PHF14O94880 888 aa23.37■■□□□ 1.33
GTF2F1-205ENST00000595047 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
GTF2F1-205ENST00000595047 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
GTF2F1-205ENST00000595047 ARXQ96QS3 562 aa23.36■■□□□ 1.33
GTF2F1-205ENST00000595047 PHAXQ9H814 394 aaKnown RBP23.36■■□□□ 1.33
GTF2F1-205ENST00000595047 C4BP0C0L5 1744 aa23.35■■□□□ 1.33
GTF2F1-205ENST00000595047 AIMP1Q12904 312 aaKnown RBP23.35■■□□□ 1.33
GTF2F1-205ENST00000595047 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
GTF2F1-205ENST00000595047 LRP10Q7Z4F1 713 aa23.35■■□□□ 1.33
GTF2F1-205ENST00000595047 A0A087WZG4 1122 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 BCAR3O75815 825 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 SSFA2P28290 1259 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 COPS6Q7L5N1 327 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 XAGE3Q8WTP9 111 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
GTF2F1-205ENST00000595047 ADRA2BP18089 450 aa23.33■■□□□ 1.33
GTF2F1-205ENST00000595047 G2E3Q7L622 706 aa23.33■■□□□ 1.33
GTF2F1-205ENST00000595047 COL15A1P39059 1388 aa23.33■■□□□ 1.32
GTF2F1-205ENST00000595047 FLAD1Q8NFF5 587 aa23.32■■□□□ 1.32
GTF2F1-205ENST00000595047 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
GTF2F1-205ENST00000595047 RREB1Q92766 1687 aa23.32■■□□□ 1.32
GTF2F1-205ENST00000595047 COL5A3P25940 1745 aaPredicted RBP23.32■■□□□ 1.32
GTF2F1-205ENST00000595047 RFC4P35249 363 aa23.31■■□□□ 1.32
GTF2F1-205ENST00000595047 BRPF1P55201 1214 aaPredicted RBP23.31■■□□□ 1.32
GTF2F1-205ENST00000595047 FLIIQ13045 1269 aa23.31■■□□□ 1.32
GTF2F1-205ENST00000595047 DZIP3Q86Y13 1208 aaKnown RBP23.31■■□□□ 1.32
GTF2F1-205ENST00000595047 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
GTF2F1-205ENST00000595047 MSH5O43196 834 aa23.3■■□□□ 1.32
GTF2F1-205ENST00000595047 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
GTF2F1-205ENST00000595047 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
GTF2F1-205ENST00000595047 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
GTF2F1-205ENST00000595047 DDX58O95786 925 aaKnown RBP23.29■■□□□ 1.32
GTF2F1-205ENST00000595047 FKBP5Q13451 457 aaPredicted RBP23.29■■□□□ 1.32
GTF2F1-205ENST00000595047 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
GTF2F1-205ENST00000595047 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
GTF2F1-205ENST00000595047 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
GTF2F1-205ENST00000595047 NUP188Q5SRE5 1749 aa23.28■■□□□ 1.32
GTF2F1-205ENST00000595047 PNPLA7Q6ZV29 1317 aa23.28■■□□□ 1.32
GTF2F1-205ENST00000595047 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
GTF2F1-205ENST00000595047 ZPR1O75312 459 aa23.27■■□□□ 1.32
GTF2F1-205ENST00000595047 ANKRD13DQ6ZTN6 518 aa23.27■■□□□ 1.32
GTF2F1-205ENST00000595047 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
GTF2F1-205ENST00000595047 IPO8O15397 1037 aaKnown RBP23.27■■□□□ 1.31
GTF2F1-205ENST00000595047 RIC3Q7Z5B4 369 aa23.27■■□□□ 1.31
GTF2F1-205ENST00000595047 ZBTB3Q9H5J0 574 aa23.27■■□□□ 1.31
GTF2F1-205ENST00000595047 NARFQ9UHQ1 456 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms