RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 USPL1Q5W0Q7 1092 aa20.28■□□□□ 0.84
SF3A2-206ENST00000592314 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
SF3A2-206ENST00000592314 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
SF3A2-206ENST00000592314 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
SF3A2-206ENST00000592314 RASSF7Q02833 373 aa20.27■□□□□ 0.84
SF3A2-206ENST00000592314 COL15A1P39059 1388 aa20.26■□□□□ 0.83
SF3A2-206ENST00000592314 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
SF3A2-206ENST00000592314 CYP19A1P11511 503 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-206ENST00000592314 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
SF3A2-206ENST00000592314 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-206ENST00000592314 SLC52A2Q9HAB3 445 aa20.26■□□□□ 0.83
SF3A2-206ENST00000592314 BCL2L12Q9HB09 334 aa20.26■□□□□ 0.83
SF3A2-206ENST00000592314 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-206ENST00000592314 AKAP4Q5JQC9 854 aa20.25■□□□□ 0.83
SF3A2-206ENST00000592314 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
SF3A2-206ENST00000592314 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
SF3A2-206ENST00000592314 SIPA1L3O60292 1781 aaPredicted RBP20.24■□□□□ 0.83
SF3A2-206ENST00000592314 NFIXQ14938 502 aa20.24■□□□□ 0.83
SF3A2-206ENST00000592314 AMER1Q5JTC6 1135 aaPredicted RBP20.24■□□□□ 0.83
SF3A2-206ENST00000592314 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
SF3A2-206ENST00000592314 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
SF3A2-206ENST00000592314 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
SF3A2-206ENST00000592314 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
SF3A2-206ENST00000592314 HMOX1P09601 288 aa20.22■□□□□ 0.83
SF3A2-206ENST00000592314 FSTL1Q12841 308 aa20.22■□□□□ 0.83
SF3A2-206ENST00000592314 ZPR1O75312 459 aa20.21■□□□□ 0.83
SF3A2-206ENST00000592314 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-206ENST00000592314 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
SF3A2-206ENST00000592314 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
SF3A2-206ENST00000592314 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
SF3A2-206ENST00000592314 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
SF3A2-206ENST00000592314 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
SF3A2-206ENST00000592314 CACNA1SQ13698 1873 aa20.19■□□□□ 0.82
SF3A2-206ENST00000592314 FER1L6Q2WGJ9 1857 aa20.19■□□□□ 0.82
SF3A2-206ENST00000592314 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
SF3A2-206ENST00000592314 COL13A1Q5TAT6 717 aaPredicted RBP20.18■□□□□ 0.82
SF3A2-206ENST00000592314 NFKBIEO00221 500 aa20.17■□□□□ 0.82
SF3A2-206ENST00000592314 SERPINB2P05120 415 aa20.17■□□□□ 0.82
SF3A2-206ENST00000592314 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
SF3A2-206ENST00000592314 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
SF3A2-206ENST00000592314 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
SF3A2-206ENST00000592314 LMNB1P20700 586 aa20.14■□□□□ 0.81
SF3A2-206ENST00000592314 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
SF3A2-206ENST00000592314 C2CD5Q86YS7 1000 aa20.14■□□□□ 0.81
SF3A2-206ENST00000592314 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.81
SF3A2-206ENST00000592314 ARFGEF2Q9Y6D5 1785 aa20.13■□□□□ 0.81
SF3A2-206ENST00000592314 POTECB2RU33 542 aa20.13■□□□□ 0.81
SF3A2-206ENST00000592314 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
SF3A2-206ENST00000592314 SLX4Q8IY92 1834 aa20.12■□□□□ 0.81
SF3A2-206ENST00000592314 GLTPD2A6NH11 291 aa20.12■□□□□ 0.81
SF3A2-206ENST00000592314 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
SF3A2-206ENST00000592314 BICDL1Q6ZP65 573 aa20.12■□□□□ 0.81
SF3A2-206ENST00000592314 TTLL6Q8N841 843 aa20.12■□□□□ 0.81
SF3A2-206ENST00000592314 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-206ENST00000592314 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
SF3A2-206ENST00000592314 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
SF3A2-206ENST00000592314 ZNF496Q96IT1 587 aaPredicted RBP20.1■□□□□ 0.81
SF3A2-206ENST00000592314 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
SF3A2-206ENST00000592314 H0YIN7 160 aa20.08■□□□□ 0.81
SF3A2-206ENST00000592314 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
SF3A2-206ENST00000592314 VEGFAP15692 232 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-206ENST00000592314 PRR5LQ6MZQ0 368 aa20.08■□□□□ 0.81
SF3A2-206ENST00000592314 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
SF3A2-206ENST00000592314 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
SF3A2-206ENST00000592314 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
SF3A2-206ENST00000592314 TBC1D2BQ9UPU7 963 aa20.06■□□□□ 0.8
SF3A2-206ENST00000592314 C21orf2O43822 256 aa20.05■□□□□ 0.8
SF3A2-206ENST00000592314 STARD3NLO95772 234 aa20.05■□□□□ 0.8
SF3A2-206ENST00000592314 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
SF3A2-206ENST00000592314 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
SF3A2-206ENST00000592314 ZNF622Q969S3 477 aaKnown RBP eCLIP20.04■□□□□ 0.8
SF3A2-206ENST00000592314 CEMIPQ8WUJ3 1361 aa20.04■□□□□ 0.8
SF3A2-206ENST00000592314 KCNQ3O43525 872 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 CAPN15O75808 1086 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 A1BGP04217 495 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 POTEIP0CG38 1075 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 POTEJP0CG39 1038 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 BRIP1Q9BX63 1249 aa20.03■□□□□ 0.8
SF3A2-206ENST00000592314 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
SF3A2-206ENST00000592314 A0A087WZG4 1122 aa20.02■□□□□ 0.8
SF3A2-206ENST00000592314 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
SF3A2-206ENST00000592314 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
SF3A2-206ENST00000592314 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
SF3A2-206ENST00000592314 IL6STP40189 918 aaPredicted RBP20.01■□□□□ 0.79
SF3A2-206ENST00000592314 TEFQ10587 303 aa20.01■□□□□ 0.79
SF3A2-206ENST00000592314 LTBP3Q9NS15 1303 aa20.01■□□□□ 0.79
SF3A2-206ENST00000592314 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
SF3A2-206ENST00000592314 PDE6BP35913 854 aa20■□□□□ 0.79
SF3A2-206ENST00000592314 PIP4K2AP48426 406 aaPredicted RBP20■□□□□ 0.79
SF3A2-206ENST00000592314 ERFEQ4G0M1 354 aa20■□□□□ 0.79
SF3A2-206ENST00000592314 TNS4Q8IZW8 715 aa20■□□□□ 0.79
SF3A2-206ENST00000592314 PRAMEF22A3QJZ6 481 aa19.99■□□□□ 0.79
SF3A2-206ENST00000592314 PHACTR3Q96KR7 559 aa19.99■□□□□ 0.79
SF3A2-206ENST00000592314 NPC1L1Q9UHC9 1359 aa19.98■□□□□ 0.79
SF3A2-206ENST00000592314 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
SF3A2-206ENST00000592314 PRPF40BQ6NWY9 871 aaKnown RBP19.98■□□□□ 0.79
SF3A2-206ENST00000592314 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
SF3A2-206ENST00000592314 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
SF3A2-206ENST00000592314 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms