RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
MBD3-209ENST00000592012 CASC1Q6TDU7 716 aa24.3■■□□□ 1.48
MBD3-209ENST00000592012 SCN11AQ9UI33 1791 aa24.29■■□□□ 1.48
MBD3-209ENST00000592012 CPDO75976 1380 aa24.29■■□□□ 1.48
MBD3-209ENST00000592012 ZNF790Q6PG37 636 aa24.29■■□□□ 1.48
MBD3-209ENST00000592012 BRINP3Q76B58 766 aa24.29■■□□□ 1.48
MBD3-209ENST00000592012 ABCC6O95255 1503 aa24.29■■□□□ 1.48
MBD3-209ENST00000592012 MX1P20591 662 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 KSR2Q6VAB6 950 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 RBM42Q9BTD8 480 aaKnown RBP24.28■■□□□ 1.48
MBD3-209ENST00000592012 HYPKQ9NX55 129 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 CHMP5Q9NZZ3 219 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
MBD3-209ENST00000592012 CD2BP2O95400 341 aaKnown RBP24.27■■□□□ 1.48
MBD3-209ENST00000592012 SLC39A6Q13433 755 aa24.27■■□□□ 1.48
MBD3-209ENST00000592012 TSHZ3Q63HK5 1081 aa24.27■■□□□ 1.48
MBD3-209ENST00000592012 STAP2Q9UGK3 403 aa24.27■■□□□ 1.48
MBD3-209ENST00000592012 GSE1Q14687 1217 aa24.27■■□□□ 1.48
MBD3-209ENST00000592012 PLEKHG2Q9H7P9 1386 aa24.26■■□□□ 1.47
MBD3-209ENST00000592012 SRGAP3O43295 1099 aa24.26■■□□□ 1.47
MBD3-209ENST00000592012 DDX21Q9NR30 783 aaKnown RBP eCLIP24.26■■□□□ 1.47
MBD3-209ENST00000592012 RAB11FIP3O75154 756 aa24.25■■□□□ 1.47
MBD3-209ENST00000592012 PDIA6Q15084 440 aa24.25■■□□□ 1.47
MBD3-209ENST00000592012 SURF6O75683 361 aaKnown RBP24.25■■□□□ 1.47
MBD3-209ENST00000592012 DDIT3P35638 169 aa24.25■■□□□ 1.47
MBD3-209ENST00000592012 CYP27B1O15528 508 aa24.24■■□□□ 1.47
MBD3-209ENST00000592012 ALDH1L1O75891 902 aa24.24■■□□□ 1.47
MBD3-209ENST00000592012 TUBGCP6Q96RT7 1819 aa24.24■■□□□ 1.47
MBD3-209ENST00000592012 STRCQ7RTU9 1775 aa24.23■■□□□ 1.47
MBD3-209ENST00000592012 DCAF5Q96JK2 942 aa24.23■■□□□ 1.47
MBD3-209ENST00000592012 ERC2O15083 957 aa24.22■■□□□ 1.47
MBD3-209ENST00000592012 REC8O95072 547 aa24.22■■□□□ 1.47
MBD3-209ENST00000592012 HSP90AB1P08238 724 aaKnown RBP24.22■■□□□ 1.47
MBD3-209ENST00000592012 IL1RAPL2Q9NP60 686 aa24.22■■□□□ 1.47
MBD3-209ENST00000592012 K7ELQ4 463 aaPredicted RBP24.21■■□□□ 1.47
MBD3-209ENST00000592012 RABEP1Q15276 862 aa24.21■■□□□ 1.47
MBD3-209ENST00000592012 RHPN1Q8TCX5 695 aa24.21■■□□□ 1.47
MBD3-209ENST00000592012 MTX1Q13505 466 aa24.21■■□□□ 1.47
MBD3-209ENST00000592012 C9orf78Q9NZ63 289 aaPredicted RBP24.21■■□□□ 1.47
MBD3-209ENST00000592012 SLAIN2Q9P270 581 aa24.21■■□□□ 1.47
MBD3-209ENST00000592012 CWF19L2Q2TBE0 894 aaKnown RBP24.2■■□□□ 1.46
MBD3-209ENST00000592012 AOX1Q06278 1338 aa24.2■■□□□ 1.46
MBD3-209ENST00000592012 ZNF496Q96IT1 587 aaPredicted RBP24.2■■□□□ 1.46
MBD3-209ENST00000592012 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
MBD3-209ENST00000592012 SOS2Q07890 1332 aaPredicted RBP24.19■■□□□ 1.46
MBD3-209ENST00000592012 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
MBD3-209ENST00000592012 LINS1Q8NG48 757 aa24.19■■□□□ 1.46
MBD3-209ENST00000592012 KIF1BPQ96EK5 621 aa24.19■■□□□ 1.46
MBD3-209ENST00000592012 AIMP1Q12904 312 aaKnown RBP24.18■■□□□ 1.46
MBD3-209ENST00000592012 MRC1P22897 1456 aa24.18■■□□□ 1.46
MBD3-209ENST00000592012 C5P01031 1676 aa24.18■■□□□ 1.46
MBD3-209ENST00000592012 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
MBD3-209ENST00000592012 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
MBD3-209ENST00000592012 TRIM6-TRIM34B2RNG4 842 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 HDAC5Q9UQL6 1122 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 RILPL2Q969X0 211 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 UTYO14607 1347 aa24.16■■□□□ 1.46
MBD3-209ENST00000592012 CHMLP26374 656 aa24.15■■□□□ 1.46
MBD3-209ENST00000592012 UNC5CLQ8IV45 518 aa24.15■■□□□ 1.46
MBD3-209ENST00000592012 ESYT1Q9BSJ8 1104 aa24.15■■□□□ 1.46
MBD3-209ENST00000592012 CIZ1Q9ULV3 898 aaPredicted RBP24.15■■□□□ 1.46
MBD3-209ENST00000592012 SNRPA1P09661 255 aaKnown RBP24.15■■□□□ 1.46
MBD3-209ENST00000592012 MCM4P33991 863 aa24.15■■□□□ 1.46
MBD3-209ENST00000592012 WDR17Q8IZU2 1322 aa24.15■■□□□ 1.46
MBD3-209ENST00000592012 GRM8O00222 908 aa24.14■■□□□ 1.46
MBD3-209ENST00000592012 MYL6BP14649 208 aa24.14■■□□□ 1.46
MBD3-209ENST00000592012 TTC5Q8N0Z6 440 aa24.14■■□□□ 1.46
MBD3-209ENST00000592012 USP16Q9Y5T5 823 aa24.14■■□□□ 1.46
MBD3-209ENST00000592012 IGKV5-2P06315 115 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 LARP1Q6PKG0 1096 aaKnown RBP24.13■■□□□ 1.45
MBD3-209ENST00000592012 RIC3Q7Z5B4 369 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 PI4K2BQ8TCG2 481 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 KAZALD1Q96I82 304 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 HSP90AA1P07900 732 aaKnown RBP24.13■■□□□ 1.45
MBD3-209ENST00000592012 CABP4P57796 275 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 LRP10Q7Z4F1 713 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 XAGE3Q8WTP9 111 aa24.13■■□□□ 1.45
MBD3-209ENST00000592012 COPS6Q7L5N1 327 aa24.12■■□□□ 1.45
MBD3-209ENST00000592012 FMNL2Q96PY5 1086 aa24.12■■□□□ 1.45
MBD3-209ENST00000592012 TOM1L2Q6ZVM7 507 aa24.11■■□□□ 1.45
MBD3-209ENST00000592012 SUCLG2Q96I99 432 aa24.1■■□□□ 1.45
MBD3-209ENST00000592012 FOXD4L1Q9NU39 408 aa24.09■■□□□ 1.45
MBD3-209ENST00000592012 OS9Q13438 667 aaPredicted RBP24.09■■□□□ 1.45
MBD3-209ENST00000592012 ZCRB1Q8TBF4 217 aaKnown RBP24.09■■□□□ 1.45
MBD3-209ENST00000592012 COL5A2P05997 1499 aaPredicted RBP24.08■■□□□ 1.45
MBD3-209ENST00000592012 USP42Q9H9J4 1324 aaKnown RBP24.08■■□□□ 1.45
MBD3-209ENST00000592012 NEURL1BA8MQ27 555 aa24.08■■□□□ 1.45
MBD3-209ENST00000592012 NEXNQ0ZGT2 675 aa24.08■■□□□ 1.45
MBD3-209ENST00000592012 METTL22Q9BUU2 404 aaPredicted RBP24.08■■□□□ 1.45
MBD3-209ENST00000592012 BICC1Q9H694 974 aaKnown RBP24.08■■□□□ 1.45
MBD3-209ENST00000592012 PA2G4Q9UQ80 394 aaKnown RBP24.08■■□□□ 1.45
MBD3-209ENST00000592012 RAB3GAP1Q15042 981 aa24.08■■□□□ 1.44
MBD3-209ENST00000592012 ANKRD13DQ6ZTN6 518 aa24.08■■□□□ 1.44
MBD3-209ENST00000592012 PARP4Q9UKK3 1724 aaKnown RBP24.07■■□□□ 1.44
MBD3-209ENST00000592012 PCDH11XQ9BZA7 1347 aa24.07■■□□□ 1.44
MBD3-209ENST00000592012 PCDH11YQ9BZA8 1340 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms