RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 A2MP01023 1474 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 MARCH6O60337 910 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 FOSBP53539 338 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 IVLP07476 585 aa12.88□□□□□ -0.35
CNTNAP1-204ENST00000591662 KIAA0754O94854 1291 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 SRGAP3O43295 1099 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 PTGS1P23219 599 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 TYRO3Q06418 890 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 STK3Q13188 491 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 ANO6Q4KMQ2 910 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 AXDND1Q5T1B0 1012 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
CNTNAP1-204ENST00000591662 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 IGSF3O75054 1194 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 BRD1O95696 1058 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 KDM6BO15054 1643 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 CASQ1P31415 396 aa12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 IRX3P78415 501 aaPredicted RBP12.86□□□□□ -0.35
CNTNAP1-204ENST00000591662 MCM3P25205 808 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 ADGBQ8N7X0 1667 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 ZSCAN16Q9H4T2 348 aaPredicted RBP12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
CNTNAP1-204ENST00000591662 VAMP4O75379 141 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 MAP9Q49MG5 647 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
CNTNAP1-204ENST00000591662 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 DACT1Q9NYF0 836 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 IQCEQ6IPM2 695 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 GPT2Q8TD30 523 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 LMAN1P49257 510 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 TUBB4BP68371 445 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 SYCP1Q15431 976 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
CNTNAP1-204ENST00000591662 GTF2A1P52655 376 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 TFIP11Q9UBB9 837 aaKnown RBP12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 KIF5CO60282 957 aa12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
CNTNAP1-204ENST00000591662 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 ARHGAP29Q52LW3 1261 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 RTEL1-TNFRSF6BF6WH68 1400 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 SYT1P21579 422 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 KIAA0556O60303 1618 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 AACSQ86V21 672 aa12.81□□□□□ -0.36
CNTNAP1-204ENST00000591662 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
CNTNAP1-204ENST00000591662 POLR1AO95602 1720 aaPredicted RBP12.8□□□□□ -0.36
CNTNAP1-204ENST00000591662 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
CNTNAP1-204ENST00000591662 STRN4Q9NRL3 753 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms