RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 RGS17Q9UGC6 210 aaPredicted RBP21.6■■□□□ 1.05
GCDH-212ENST00000590530 RGS12O14924 1447 aa21.59■■□□□ 1.05
GCDH-212ENST00000590530 PAPPAQ13219 1627 aa21.59■■□□□ 1.05
GCDH-212ENST00000590530 SNRPA1P09661 255 aaKnown RBP21.59■■□□□ 1.05
GCDH-212ENST00000590530 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
GCDH-212ENST00000590530 PDIA6Q15084 440 aa21.58■■□□□ 1.05
GCDH-212ENST00000590530 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
GCDH-212ENST00000590530 KAT6BQ8WYB5 2073 aa21.58■■□□□ 1.04
GCDH-212ENST00000590530 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.04
GCDH-212ENST00000590530 SLC4A9Q96Q91 983 aa21.58■■□□□ 1.04
GCDH-212ENST00000590530 F6X3S4 739 aa21.57■■□□□ 1.04
GCDH-212ENST00000590530 FLIIQ13045 1269 aa21.57■■□□□ 1.04
GCDH-212ENST00000590530 ZNF772Q68DY9 489 aaPredicted RBP21.56■■□□□ 1.04
GCDH-212ENST00000590530 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
GCDH-212ENST00000590530 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
GCDH-212ENST00000590530 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
GCDH-212ENST00000590530 ABCC4O15439 1325 aa21.55■■□□□ 1.04
GCDH-212ENST00000590530 ITPRIPQ8IWB1 547 aa21.54■■□□□ 1.04
GCDH-212ENST00000590530 DBF4Q9UBU7 674 aaPredicted RBP21.54■■□□□ 1.04
GCDH-212ENST00000590530 MYL6BP14649 208 aa21.53■■□□□ 1.04
GCDH-212ENST00000590530 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
GCDH-212ENST00000590530 DNAJC10Q8IXB1 793 aa21.53■■□□□ 1.04
GCDH-212ENST00000590530 API5Q9BZZ5 524 aaKnown RBP21.53■■□□□ 1.04
GCDH-212ENST00000590530 PTPRCP08575 1304 aa21.53■■□□□ 1.04
GCDH-212ENST00000590530 A1BGP04217 495 aa21.52■■□□□ 1.04
GCDH-212ENST00000590530 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
GCDH-212ENST00000590530 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
GCDH-212ENST00000590530 NBPF26B4DH59 902 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 NBPF14Q5TI25 921 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 NBPF10Q6P3W6 841 aaKnown RBP21.52■■□□□ 1.03
GCDH-212ENST00000590530 POTEAQ6S8J7 498 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 NBPF15Q8N660 670 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 DDX19BQ9UMR2 479 aa21.52■■□□□ 1.03
GCDH-212ENST00000590530 CACNA1FO60840 1977 aa21.51■■□□□ 1.03
GCDH-212ENST00000590530 DDX21Q9NR30 783 aaKnown RBP eCLIP21.51■■□□□ 1.03
GCDH-212ENST00000590530 EP400Q96L91 3159 aa21.51■■□□□ 1.03
GCDH-212ENST00000590530 SLC4A10Q6U841 1118 aa21.49■■□□□ 1.03
GCDH-212ENST00000590530 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
GCDH-212ENST00000590530 KCNQ4P56696 695 aa21.47■■□□□ 1.03
GCDH-212ENST00000590530 KRT27Q7Z3Y8 459 aa21.47■■□□□ 1.03
GCDH-212ENST00000590530 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
GCDH-212ENST00000590530 INTS3Q68E01 1043 aaKnown RBP21.47■■□□□ 1.03
GCDH-212ENST00000590530 XAGE3Q8WTP9 111 aa21.47■■□□□ 1.03
GCDH-212ENST00000590530 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
GCDH-212ENST00000590530 ADCY9O60503 1353 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 PALLDQ8WX93 1383 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 RXRBP28702 533 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 PCDHB15Q9Y5E8 787 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 BRWD3Q6RI45 1802 aa21.46■■□□□ 1.03
GCDH-212ENST00000590530 ZBTB7BO15156 539 aaPredicted RBP21.45■■□□□ 1.02
GCDH-212ENST00000590530 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
GCDH-212ENST00000590530 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
GCDH-212ENST00000590530 SIK1P57059 783 aa21.45■■□□□ 1.02
GCDH-212ENST00000590530 ITPK1Q13572 414 aa21.45■■□□□ 1.02
GCDH-212ENST00000590530 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
GCDH-212ENST00000590530 CHMP4BQ9H444 224 aaKnown RBP21.45■■□□□ 1.02
GCDH-212ENST00000590530 CYP19A1P11511 503 aaPredicted RBP21.44■■□□□ 1.02
GCDH-212ENST00000590530 ZBTB40Q9NUA8 1239 aa21.44■■□□□ 1.02
GCDH-212ENST00000590530 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
GCDH-212ENST00000590530 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
GCDH-212ENST00000590530 C1orf115Q9H7X2 142 aa21.43■■□□□ 1.02
GCDH-212ENST00000590530 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
GCDH-212ENST00000590530 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
GCDH-212ENST00000590530 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
GCDH-212ENST00000590530 N4BP2Q86UW6 1770 aaPredicted RBP21.41■■□□□ 1.02
GCDH-212ENST00000590530 IGHDP01880 384 aa21.41■■□□□ 1.02
GCDH-212ENST00000590530 MEIS3Q99687 375 aa21.41■■□□□ 1.02
GCDH-212ENST00000590530 NHSQ6T4R5 1651 aa21.4■■□□□ 1.02
GCDH-212ENST00000590530 TJP1Q07157 1748 aa21.4■■□□□ 1.02
GCDH-212ENST00000590530 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
GCDH-212ENST00000590530 ZBTB1Q9Y2K1 713 aa21.4■■□□□ 1.02
GCDH-212ENST00000590530 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
GCDH-212ENST00000590530 TRIM37O94972 964 aa21.39■■□□□ 1.02
GCDH-212ENST00000590530 STARD3NLO95772 234 aa21.39■■□□□ 1.02
GCDH-212ENST00000590530 BEND3Q5T5X7 828 aa21.39■■□□□ 1.02
GCDH-212ENST00000590530 SMARCC1Q92922 1105 aaPredicted RBP21.39■■□□□ 1.02
GCDH-212ENST00000590530 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.02
GCDH-212ENST00000590530 ERBB4Q15303 1308 aa21.38■■□□□ 1.01
GCDH-212ENST00000590530 BTAF1O14981 1849 aa21.38■■□□□ 1.01
GCDH-212ENST00000590530 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
GCDH-212ENST00000590530 FAM196AQ6ZSG2 479 aa21.38■■□□□ 1.01
GCDH-212ENST00000590530 SBF2Q86WG5 1849 aa21.38■■□□□ 1.01
GCDH-212ENST00000590530 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
GCDH-212ENST00000590530 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
GCDH-212ENST00000590530 BCL11BQ9C0K0 894 aaPredicted RBP21.37■■□□□ 1.01
GCDH-212ENST00000590530 RWDD1Q9H446 243 aaPredicted RBP21.37■■□□□ 1.01
GCDH-212ENST00000590530 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
GCDH-212ENST00000590530 ANKRD13DQ6ZTN6 518 aa21.37■■□□□ 1.01
GCDH-212ENST00000590530 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
GCDH-212ENST00000590530 LINC00116Q8NCU8 138 aa21.37■■□□□ 1.01
GCDH-212ENST00000590530 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
GCDH-212ENST00000590530 CRKLP46109 303 aaKnown RBP21.36■■□□□ 1.01
GCDH-212ENST00000590530 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
GCDH-212ENST00000590530 DDX58O95786 925 aaKnown RBP21.35■■□□□ 1.01
GCDH-212ENST00000590530 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
GCDH-212ENST00000590530 SKAP1Q86WV1 359 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms