RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
TPM4-212ENST00000590180 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
TPM4-212ENST00000590180 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
TPM4-212ENST00000590180 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
TPM4-212ENST00000590180 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
TPM4-212ENST00000590180 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
TPM4-212ENST00000590180 VIRMAQ69YN4 1812 aaKnown RBP15.93■□□□□ 0.14
TPM4-212ENST00000590180 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
TPM4-212ENST00000590180 A1BGP04217 495 aa15.92■□□□□ 0.14
TPM4-212ENST00000590180 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
TPM4-212ENST00000590180 FKBP8Q14318 412 aa15.92■□□□□ 0.14
TPM4-212ENST00000590180 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
TPM4-212ENST00000590180 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
TPM4-212ENST00000590180 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
TPM4-212ENST00000590180 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
TPM4-212ENST00000590180 A0A087WZG4 1122 aa15.91■□□□□ 0.14
TPM4-212ENST00000590180 YY1P25490 414 aa15.91■□□□□ 0.14
TPM4-212ENST00000590180 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
TPM4-212ENST00000590180 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
TPM4-212ENST00000590180 COL24A1Q17RW2 1714 aa15.91■□□□□ 0.14
TPM4-212ENST00000590180 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
TPM4-212ENST00000590180 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
TPM4-212ENST00000590180 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
TPM4-212ENST00000590180 COL5A3P25940 1745 aaPredicted RBP15.9■□□□□ 0.14
TPM4-212ENST00000590180 TJP1Q07157 1748 aa15.89■□□□□ 0.13
TPM4-212ENST00000590180 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
TPM4-212ENST00000590180 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
TPM4-212ENST00000590180 COL15A1P39059 1388 aa15.88■□□□□ 0.13
TPM4-212ENST00000590180 ANP32CO43423 234 aa15.88■□□□□ 0.13
TPM4-212ENST00000590180 IL6STP40189 918 aaPredicted RBP15.88■□□□□ 0.13
TPM4-212ENST00000590180 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
TPM4-212ENST00000590180 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
TPM4-212ENST00000590180 TM4SF1P30408 202 aa15.87■□□□□ 0.13
TPM4-212ENST00000590180 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
TPM4-212ENST00000590180 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
TPM4-212ENST00000590180 DDR1Q08345 913 aa15.86■□□□□ 0.13
TPM4-212ENST00000590180 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
TPM4-212ENST00000590180 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
TPM4-212ENST00000590180 A0A0G2JLW4 131 aa15.85■□□□□ 0.13
TPM4-212ENST00000590180 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
TPM4-212ENST00000590180 TGFB2P61812 414 aa15.85■□□□□ 0.13
TPM4-212ENST00000590180 NFIXQ14938 502 aa15.85■□□□□ 0.13
TPM4-212ENST00000590180 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
TPM4-212ENST00000590180 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
TPM4-212ENST00000590180 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
TPM4-212ENST00000590180 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
TPM4-212ENST00000590180 UBR2Q8IWV8 1755 aa15.84■□□□□ 0.13
TPM4-212ENST00000590180 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
TPM4-212ENST00000590180 DPEP1P16444 411 aa15.83■□□□□ 0.12
TPM4-212ENST00000590180 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
TPM4-212ENST00000590180 DZIP3Q86Y13 1208 aaKnown RBP15.83■□□□□ 0.12
TPM4-212ENST00000590180 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
TPM4-212ENST00000590180 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.12
TPM4-212ENST00000590180 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 APAF1O14727 1248 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 SERPINB2P05120 415 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
TPM4-212ENST00000590180 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
TPM4-212ENST00000590180 TBC1D9BQ66K14 1250 aa15.81■□□□□ 0.12
TPM4-212ENST00000590180 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
TPM4-212ENST00000590180 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
TPM4-212ENST00000590180 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
TPM4-212ENST00000590180 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
TPM4-212ENST00000590180 MRS2Q9HD23 443 aa15.8■□□□□ 0.12
TPM4-212ENST00000590180 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
TPM4-212ENST00000590180 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
TPM4-212ENST00000590180 MYL6BP14649 208 aa15.79■□□□□ 0.12
TPM4-212ENST00000590180 CHL1O00533 1208 aa15.78■□□□□ 0.12
TPM4-212ENST00000590180 NPHP1O15259 732 aa15.78■□□□□ 0.12
TPM4-212ENST00000590180 CHRNA5P30532 468 aa15.78■□□□□ 0.12
TPM4-212ENST00000590180 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
TPM4-212ENST00000590180 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.12
TPM4-212ENST00000590180 SENP3-EIF4A1A0A087X0R7 540 aa15.77■□□□□ 0.12
TPM4-212ENST00000590180 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
TPM4-212ENST00000590180 ZNF652Q9Y2D9 606 aa15.77■□□□□ 0.12
TPM4-212ENST00000590180 KCNA3P22001 575 aa15.76■□□□□ 0.11
TPM4-212ENST00000590180 ARHGAP27Q6ZUM4 889 aa15.76■□□□□ 0.11
TPM4-212ENST00000590180 CCDC24Q8N4L8 307 aa15.76■□□□□ 0.11
TPM4-212ENST00000590180 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
TPM4-212ENST00000590180 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
TPM4-212ENST00000590180 C2CD5Q86YS7 1000 aa15.75■□□□□ 0.11
TPM4-212ENST00000590180 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
TPM4-212ENST00000590180 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
TPM4-212ENST00000590180 H0YIN7 160 aa15.74■□□□□ 0.11
TPM4-212ENST00000590180 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
TPM4-212ENST00000590180 HLFQ16534 295 aa15.74■□□□□ 0.11
TPM4-212ENST00000590180 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
TPM4-212ENST00000590180 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
TPM4-212ENST00000590180 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
TPM4-212ENST00000590180 NIP7Q9Y221 180 aaKnown RBP eCLIP15.74■□□□□ 0.11
TPM4-212ENST00000590180 KRT24Q2M2I5 525 aa15.73■□□□□ 0.11
TPM4-212ENST00000590180 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
TPM4-212ENST00000590180 TTLL7Q6ZT98 887 aa15.73■□□□□ 0.11
TPM4-212ENST00000590180 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
TPM4-212ENST00000590180 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
TPM4-212ENST00000590180 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
TPM4-212ENST00000590180 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 ANXA1P04083 346 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms