RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 GRIN3BO60391 1043 aa27.34■■□□□ 1.97
CIRBP-226ENST00000590171 NEFMP07197 916 aa27.34■■□□□ 1.97
CIRBP-226ENST00000590171 CANXP27824 592 aaKnown RBP27.34■■□□□ 1.97
CIRBP-226ENST00000590171 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
CIRBP-226ENST00000590171 PXDNLA1KZ92 1463 aa27.33■■□□□ 1.97
CIRBP-226ENST00000590171 KIF13BQ9NQT8 1826 aa27.33■■□□□ 1.97
CIRBP-226ENST00000590171 ZPR1O75312 459 aa27.33■■□□□ 1.97
CIRBP-226ENST00000590171 TEX13AQ9BXU3 409 aaPredicted RBP27.33■■□□□ 1.97
CIRBP-226ENST00000590171 WWC3Q9ULE0 1092 aa27.33■■□□□ 1.97
CIRBP-226ENST00000590171 MYBBP1AQ9BQG0 1328 aaKnown RBP27.33■■□□□ 1.97
CIRBP-226ENST00000590171 GOLGB1Q14789 3259 aaKnown RBP27.32■■□□□ 1.96
CIRBP-226ENST00000590171 CHD4Q14839 1912 aa27.32■■□□□ 1.96
CIRBP-226ENST00000590171 DDR1Q08345 913 aa27.32■■□□□ 1.96
CIRBP-226ENST00000590171 NARFQ9UHQ1 456 aa27.32■■□□□ 1.96
CIRBP-226ENST00000590171 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
CIRBP-226ENST00000590171 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
CIRBP-226ENST00000590171 TM4SF1P30408 202 aa27.29■■□□□ 1.96
CIRBP-226ENST00000590171 TGFB2P61812 414 aa27.29■■□□□ 1.96
CIRBP-226ENST00000590171 NFE2L2Q16236 605 aa27.29■■□□□ 1.96
CIRBP-226ENST00000590171 BCL2L12Q9HB09 334 aa27.29■■□□□ 1.96
CIRBP-226ENST00000590171 MAPK8IP3Q9UPT6 1336 aa27.28■■□□□ 1.96
CIRBP-226ENST00000590171 ZNF784Q8NCA9 323 aaPredicted RBP27.28■■□□□ 1.96
CIRBP-226ENST00000590171 PNNQ9H307 717 aaKnown RBP27.28■■□□□ 1.96
CIRBP-226ENST00000590171 POLRMTO00411 1230 aaKnown RBP27.27■■□□□ 1.96
CIRBP-226ENST00000590171 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-226ENST00000590171 DLG5Q8TDM6 1919 aa27.26■■□□□ 1.95
CIRBP-226ENST00000590171 PRAMEF22A3QJZ6 481 aa27.26■■□□□ 1.95
CIRBP-226ENST00000590171 A1BGP04217 495 aa27.26■■□□□ 1.95
CIRBP-226ENST00000590171 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
CIRBP-226ENST00000590171 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
CIRBP-226ENST00000590171 NFIXQ14938 502 aa27.25■■□□□ 1.95
CIRBP-226ENST00000590171 USP16Q9Y5T5 823 aa27.25■■□□□ 1.95
CIRBP-226ENST00000590171 A0A087WZG4 1122 aa27.24■■□□□ 1.95
CIRBP-226ENST00000590171 IL6STP40189 918 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-226ENST00000590171 MIS18AQ9NYP9 233 aa27.24■■□□□ 1.95
CIRBP-226ENST00000590171 ZNF330Q9Y3S2 320 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-226ENST00000590171 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-226ENST00000590171 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
CIRBP-226ENST00000590171 DPEP1P16444 411 aa27.23■■□□□ 1.95
CIRBP-226ENST00000590171 THUMPD2Q9BTF0 503 aaKnown RBP27.23■■□□□ 1.95
CIRBP-226ENST00000590171 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
CIRBP-226ENST00000590171 SCN7AQ01118 1682 aa27.21■■□□□ 1.95
CIRBP-226ENST00000590171 PIP4K2AP48426 406 aaPredicted RBP27.2■■□□□ 1.94
CIRBP-226ENST00000590171 TBC1D2BQ9UPU7 963 aa27.2■■□□□ 1.94
CIRBP-226ENST00000590171 KCNA3P22001 575 aa27.19■■□□□ 1.94
CIRBP-226ENST00000590171 PNISRQ8TF01 805 aaKnown RBP27.19■■□□□ 1.94
CIRBP-226ENST00000590171 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
CIRBP-226ENST00000590171 BCS1LQ9Y276 419 aa27.18■■□□□ 1.94
CIRBP-226ENST00000590171 NRXN2Q9P2S2 1712 aa27.18■■□□□ 1.94
CIRBP-226ENST00000590171 SERPINB2P05120 415 aa27.17■■□□□ 1.94
CIRBP-226ENST00000590171 BICDL1Q6ZP65 573 aa27.17■■□□□ 1.94
CIRBP-226ENST00000590171 RIPK4P57078 832 aa27.16■■□□□ 1.94
CIRBP-226ENST00000590171 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
CIRBP-226ENST00000590171 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
CIRBP-226ENST00000590171 CAMTA2O94983 1202 aa27.15■■□□□ 1.94
CIRBP-226ENST00000590171 TMPOP42166 694 aaKnown RBP27.15■■□□□ 1.94
CIRBP-226ENST00000590171 CCDC146Q8IYE0 955 aa27.15■■□□□ 1.94
CIRBP-226ENST00000590171 AFDNP55196 1824 aaKnown RBP27.15■■□□□ 1.94
CIRBP-226ENST00000590171 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
CIRBP-226ENST00000590171 NBPF26B4DH59 902 aa27.14■■□□□ 1.94
CIRBP-226ENST00000590171 CHRNA5P30532 468 aa27.14■■□□□ 1.94
CIRBP-226ENST00000590171 WDR43Q15061 677 aaKnown RBP eCLIP27.14■■□□□ 1.94
CIRBP-226ENST00000590171 NBPF10Q6P3W6 841 aaKnown RBP27.14■■□□□ 1.94
CIRBP-226ENST00000590171 DZIP3Q86Y13 1208 aaKnown RBP27.14■■□□□ 1.94
CIRBP-226ENST00000590171 NBPF15Q8N660 670 aa27.14■■□□□ 1.94
CIRBP-226ENST00000590171 EIF4A1P60842 406 aaKnown RBP27.13■■□□□ 1.93
CIRBP-226ENST00000590171 LAMB4A4D0S4 1761 aa27.12■■□□□ 1.93
CIRBP-226ENST00000590171 CARMIL3Q8ND23 1372 aa27.12■■□□□ 1.93
CIRBP-226ENST00000590171 PIM2Q9P1W9 311 aa27.12■■□□□ 1.93
CIRBP-226ENST00000590171 RRP7AQ9Y3A4 280 aaKnown RBP27.12■■□□□ 1.93
CIRBP-226ENST00000590171 BCORQ6W2J9 1755 aa27.12■■□□□ 1.93
CIRBP-226ENST00000590171 ADCY9O60503 1353 aa27.11■■□□□ 1.93
CIRBP-226ENST00000590171 GIGYF1O75420 1035 aaPredicted RBP27.11■■□□□ 1.93
CIRBP-226ENST00000590171 ADAMTS8Q9UP79 889 aa27.11■■□□□ 1.93
CIRBP-226ENST00000590171 RUNDC1Q96C34 613 aa27.1■■□□□ 1.93
CIRBP-226ENST00000590171 ATP10DQ9P241 1426 aa27.09■■□□□ 1.93
CIRBP-226ENST00000590171 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
CIRBP-226ENST00000590171 TSPYL4Q9UJ04 414 aa27.08■■□□□ 1.93
CIRBP-226ENST00000590171 NEUROD2Q15784 382 aa27.07■■□□□ 1.92
CIRBP-226ENST00000590171 DALRD3Q5D0E6 543 aaKnown RBP27.07■■□□□ 1.92
CIRBP-226ENST00000590171 PRR5LQ6MZQ0 368 aa27.06■■□□□ 1.92
CIRBP-226ENST00000590171 ARHGAP27Q6ZUM4 889 aa27.05■■□□□ 1.92
CIRBP-226ENST00000590171 SETDB2Q96T68 719 aa27.05■■□□□ 1.92
CIRBP-226ENST00000590171 ARFGEF1Q9Y6D6 1849 aa27.04■■□□□ 1.92
CIRBP-226ENST00000590171 CLEC4GQ6UXB4 293 aa27.04■■□□□ 1.92
CIRBP-226ENST00000590171 CCDC24Q8N4L8 307 aa27.03■■□□□ 1.92
CIRBP-226ENST00000590171 BABAM1Q9NWV8 329 aa27.03■■□□□ 1.92
CIRBP-226ENST00000590171 TRIM35Q9UPQ4 493 aa27.03■■□□□ 1.92
CIRBP-226ENST00000590171 C2CD5Q86YS7 1000 aa27.02■■□□□ 1.92
CIRBP-226ENST00000590171 ZNF652Q9Y2D9 606 aa27.02■■□□□ 1.92
CIRBP-226ENST00000590171 DLEC1Q9Y238 1755 aa27.02■■□□□ 1.92
CIRBP-226ENST00000590171 CNBD1Q8NA66 436 aa27.01■■□□□ 1.91
CIRBP-226ENST00000590171 ANKRD31Q8N7Z5 1873 aa27■■□□□ 1.91
CIRBP-226ENST00000590171 ZNF316A6NFI3 1004 aaPredicted RBP27■■□□□ 1.91
CIRBP-226ENST00000590171 RGL2O15211 777 aa27■■□□□ 1.91
CIRBP-226ENST00000590171 NGEFQ8N5V2 710 aa27■■□□□ 1.91
CIRBP-226ENST00000590171 BRIP1Q9BX63 1249 aa27■■□□□ 1.91
CIRBP-226ENST00000590171 H0YIN7 160 aa26.99■■□□□ 1.91
CIRBP-226ENST00000590171 HLFQ16534 295 aa26.99■■□□□ 1.91
CIRBP-226ENST00000590171 MYL6BP14649 208 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms