RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GDF11O95390 407 aa8.51□□□□□ -1.05
DNMT1-220ENST00000589351 RASSF7Q02833 373 aa8.51□□□□□ -1.05
DNMT1-220ENST00000589351 ARID5BQ14865 1188 aa8.51□□□□□ -1.05
DNMT1-220ENST00000589351 MEX3CQ5U5Q3 659 aaKnown RBP8.51□□□□□ -1.05
DNMT1-220ENST00000589351 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
DNMT1-220ENST00000589351 NCOA3Q9Y6Q9 1424 aa8.51□□□□□ -1.05
DNMT1-220ENST00000589351 RPRD2Q5VT52 1461 aaKnown RBP8.51□□□□□ -1.05
DNMT1-220ENST00000589351 PLEKHG1Q9ULL1 1385 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 NR3C2P08235 984 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 KRT76Q01546 638 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-220ENST00000589351 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
DNMT1-220ENST00000589351 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
DNMT1-220ENST00000589351 C19orf44Q9H6X5 657 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 ANKRD50Q9ULJ7 1429 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 SPATA31A6Q5VVP1 1343 aa8.5□□□□□ -1.05
DNMT1-220ENST00000589351 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
DNMT1-220ENST00000589351 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
DNMT1-220ENST00000589351 BMP2P12643 396 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 SSTR3P32745 418 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-220ENST00000589351 CTHP32929 405 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 MTMR2Q13614 643 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 ADGRL2O95490 1459 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 PHLPP1O60346 1717 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 NWD1Q149M9 1564 aa8.48□□□□□ -1.05
DNMT1-220ENST00000589351 GRM5P41594 1212 aa8.47□□□□□ -1.05
DNMT1-220ENST00000589351 NR5A1Q13285 461 aa8.47□□□□□ -1.05
DNMT1-220ENST00000589351 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
DNMT1-220ENST00000589351 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
DNMT1-220ENST00000589351 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
DNMT1-220ENST00000589351 CHD2O14647 1828 aaKnown RBP8.47□□□□□ -1.05
DNMT1-220ENST00000589351 PIK3R4Q99570 1358 aa8.47□□□□□ -1.05
DNMT1-220ENST00000589351 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
DNMT1-220ENST00000589351 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
DNMT1-220ENST00000589351 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
DNMT1-220ENST00000589351 ZFYVE9O95405 1425 aa8.46□□□□□ -1.06
DNMT1-220ENST00000589351 UPP2O95045 317 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 RXRBP28702 533 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
DNMT1-220ENST00000589351 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 AMOTL2Q9Y2J4 779 aa8.45□□□□□ -1.06
DNMT1-220ENST00000589351 ZNF326Q5BKZ1 582 aaKnown RBP8.44□□□□□ -1.06
DNMT1-220ENST00000589351 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
DNMT1-220ENST00000589351 LRRC59Q96AG4 307 aaKnown RBP8.44□□□□□ -1.06
DNMT1-220ENST00000589351 TMEM131LA2VDJ0 1609 aa8.43□□□□□ -1.06
DNMT1-220ENST00000589351 GCC2Q8IWJ2 1684 aa8.43□□□□□ -1.06
DNMT1-220ENST00000589351 NUTM2BA6NNL0 878 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-220ENST00000589351 NUTM2EB1AL46 878 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-220ENST00000589351 NUTM2AQ8IVF1 878 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-220ENST00000589351 NUP155O75694 1391 aa8.43□□□□□ -1.06
DNMT1-220ENST00000589351 DIP2AQ14689 1571 aa8.43□□□□□ -1.06
DNMT1-220ENST00000589351 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
DNMT1-220ENST00000589351 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
DNMT1-220ENST00000589351 SPTLC1O15269 473 aa8.42□□□□□ -1.06
DNMT1-220ENST00000589351 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
DNMT1-220ENST00000589351 TRPM2O94759 1503 aa8.42□□□□□ -1.06
DNMT1-220ENST00000589351 MYO5BQ9ULV0 1848 aa8.42□□□□□ -1.06
DNMT1-220ENST00000589351 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-220ENST00000589351 COL16A1Q07092 1604 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-220ENST00000589351 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
DNMT1-220ENST00000589351 ITGAEP38570 1179 aa8.41□□□□□ -1.06
DNMT1-220ENST00000589351 AGERQ15109 404 aa8.41□□□□□ -1.06
DNMT1-220ENST00000589351 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-220ENST00000589351 BRINP3Q76B58 766 aa8.41□□□□□ -1.06
DNMT1-220ENST00000589351 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-220ENST00000589351 DCCP43146 1447 aa8.4□□□□□ -1.06
DNMT1-220ENST00000589351 ADAMTS13Q76LX8 1427 aa8.4□□□□□ -1.06
DNMT1-220ENST00000589351 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
DNMT1-220ENST00000589351 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.07
DNMT1-220ENST00000589351 UNC13BO14795 1591 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 AFF2P51816 1311 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 PTSQ03393 145 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.07
DNMT1-220ENST00000589351 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 BPHLQ86WA6 291 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-220ENST00000589351 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 QTRT2Q9H974 415 aaKnown RBP8.39□□□□□ -1.07
DNMT1-220ENST00000589351 E9PCH4 1651 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 SHPRHQ149N8 1683 aa8.39□□□□□ -1.07
DNMT1-220ENST00000589351 RBM6P78332 1123 aaKnown RBP8.38□□□□□ -1.07
DNMT1-220ENST00000589351 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
DNMT1-220ENST00000589351 GPAT2Q6NUI2 795 aa8.38□□□□□ -1.07
DNMT1-220ENST00000589351 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
DNMT1-220ENST00000589351 TSEN34Q9BSV6 310 aaKnown RBP8.38□□□□□ -1.07
DNMT1-220ENST00000589351 CDK12Q9NYV4 1490 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-220ENST00000589351 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 LRP6O75581 1613 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 IQGAP3Q86VI3 1631 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 TTLL8A6PVC2 850 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 IRS1P35568 1242 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-220ENST00000589351 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms