RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 STK26Q9P289 416 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 TRPM2O94759 1503 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 GDF9O60383 454 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 SH3BP2P78314 561 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 SKOR1P84550 965 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 NR6A1Q15406 480 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 RPGRIP1LQ68CZ1 1315 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
DNMT1-219ENST00000589349 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
DNMT1-219ENST00000589349 KIF1BO60333 1816 aa12.02□□□□□ -0.48
DNMT1-219ENST00000589349 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-219ENST00000589349 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.49
DNMT1-219ENST00000589349 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
DNMT1-219ENST00000589349 METP08581 1390 aa12.02□□□□□ -0.49
DNMT1-219ENST00000589349 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 GFRA3O60609 400 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
DNMT1-219ENST00000589349 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
DNMT1-219ENST00000589349 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 FAM135BQ49AJ0 1406 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
DNMT1-219ENST00000589349 ALKQ9UM73 1620 aa12□□□□□ -0.49
DNMT1-219ENST00000589349 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
DNMT1-219ENST00000589349 PTPRUQ92729 1446 aa12□□□□□ -0.49
DNMT1-219ENST00000589349 NWD1Q149M9 1564 aa12□□□□□ -0.49
DNMT1-219ENST00000589349 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
DNMT1-219ENST00000589349 XIRP1Q702N8 1843 aaKnown RBP12□□□□□ -0.49
DNMT1-219ENST00000589349 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-219ENST00000589349 NEXMIFQ5QGS0 1516 aa11.98□□□□□ -0.49
DNMT1-219ENST00000589349 AGERQ15109 404 aa11.98□□□□□ -0.49
DNMT1-219ENST00000589349 BPHLQ86WA6 291 aaPredicted RBP11.98□□□□□ -0.49
DNMT1-219ENST00000589349 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
DNMT1-219ENST00000589349 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
DNMT1-219ENST00000589349 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
DNMT1-219ENST00000589349 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
DNMT1-219ENST00000589349 VARSP26640 1264 aaKnown RBP11.97□□□□□ -0.49
DNMT1-219ENST00000589349 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
DNMT1-219ENST00000589349 CYP4X1Q8N118 509 aa11.97□□□□□ -0.49
DNMT1-219ENST00000589349 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
DNMT1-219ENST00000589349 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
DNMT1-219ENST00000589349 EPS8L1Q8TE68 723 aa11.96□□□□□ -0.49
DNMT1-219ENST00000589349 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.49
DNMT1-219ENST00000589349 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
DNMT1-219ENST00000589349 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
DNMT1-219ENST00000589349 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
DNMT1-219ENST00000589349 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-219ENST00000589349 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
DNMT1-219ENST00000589349 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
DNMT1-219ENST00000589349 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
DNMT1-219ENST00000589349 FOXJ1Q92949 421 aa11.94□□□□□ -0.5
DNMT1-219ENST00000589349 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
DNMT1-219ENST00000589349 JCADQ9P266 1359 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 TTC24A2A3L6 582 aaPredicted RBP11.93□□□□□ -0.5
DNMT1-219ENST00000589349 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
DNMT1-219ENST00000589349 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 DDX17Q92841 729 aaKnown RBP11.93□□□□□ -0.5
DNMT1-219ENST00000589349 TOR4AQ9NXH8 423 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 GPSM3Q9Y4H4 160 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
DNMT1-219ENST00000589349 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
DNMT1-219ENST00000589349 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
DNMT1-219ENST00000589349 PHLPP1O60346 1717 aa11.92□□□□□ -0.5
DNMT1-219ENST00000589349 PTK2Q05397 1052 aa11.92□□□□□ -0.5
DNMT1-219ENST00000589349 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
DNMT1-219ENST00000589349 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
DNMT1-219ENST00000589349 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
DNMT1-219ENST00000589349 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
DNMT1-219ENST00000589349 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
DNMT1-219ENST00000589349 POGKQ9P215 609 aa11.91□□□□□ -0.5
DNMT1-219ENST00000589349 FLIIQ13045 1269 aa11.9□□□□□ -0.5
DNMT1-219ENST00000589349 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
DNMT1-219ENST00000589349 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
DNMT1-219ENST00000589349 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
DNMT1-219ENST00000589349 MAGEB6P1A0A0J9YX57 407 aa11.89□□□□□ -0.51
DNMT1-219ENST00000589349 SIAH2O43255 324 aa11.89□□□□□ -0.51
DNMT1-219ENST00000589349 MCM6Q14566 821 aa11.89□□□□□ -0.51
DNMT1-219ENST00000589349 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
DNMT1-219ENST00000589349 DHX57Q6P158 1386 aaKnown RBP11.89□□□□□ -0.51
DNMT1-219ENST00000589349 PPLO60437 1756 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 FAM187AA6NFU0 413 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 DGAT1O75907 488 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 MPNDQ8N594 471 aa11.88□□□□□ -0.51
DNMT1-219ENST00000589349 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
DNMT1-219ENST00000589349 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 DCCP43146 1447 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 MST1RQ04912 1400 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 ADAMTS2O95450 1211 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 XPCQ01831 940 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-219ENST00000589349 ZBTB33Q86T24 672 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 C1QTNF2Q9BXJ5 285 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
DNMT1-219ENST00000589349 C14orf93Q9H972 538 aaKnown RBP11.87□□□□□ -0.51
DNMT1-219ENST00000589349 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms