RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	ZNF496	Q96IT1	587 aa	Predicted RBP	28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	COL15A1	P39059	1388 aa		28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	CEMIP	Q8WUJ3	1361 aa		28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	PXDNL	A1KZ92	1463 aa		28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	GIGYF1	O75420	1035 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-222	ENST00000589235	TM4SF1	P30408	202 aa		28.32	■■■□□ 2.12
CIRBP-222	ENST00000589235	BCS1L	Q9Y276	419 aa		28.32	■■■□□ 2.12
CIRBP-222	ENST00000589235	HEG1	Q9ULI3	1381 aa		28.32	■■■□□ 2.12
CIRBP-222	ENST00000589235	HTATSF1	O43719	755 aa	Known RBP	28.31	■■■□□ 2.12
CIRBP-222	ENST00000589235	DPEP1	P16444	411 aa		28.31	■■■□□ 2.12
CIRBP-222	ENST00000589235	DDR1	Q08345	913 aa		28.29	■■■□□ 2.12
CIRBP-222	ENST00000589235	VIRMA	Q69YN4	1812 aa	Known RBP	28.29	■■■□□ 2.12
CIRBP-222	ENST00000589235	POLRMT	O00411	1230 aa	Known RBP	28.28	■■■□□ 2.12
CIRBP-222	ENST00000589235	C1QTNF8	P60827	252 aa		28.28	■■■□□ 2.12
CIRBP-222	ENST00000589235	PNN	Q9H307	717 aa	Known RBP	28.28	■■■□□ 2.12
CIRBP-222	ENST00000589235	PIM2	Q9P1W9	311 aa		28.28	■■■□□ 2.12
CIRBP-222	ENST00000589235	KIF13B	Q9NQT8	1826 aa		28.27	■■■□□ 2.12
CIRBP-222	ENST00000589235	EIF5	P55010	431 aa	Known RBP	28.26	■■■□□ 2.11
CIRBP-222	ENST00000589235	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.25	■■■□□ 2.11
CIRBP-222	ENST00000589235	ATP10D	Q9P241	1426 aa		28.25	■■■□□ 2.11
CIRBP-222	ENST00000589235	UBR2	Q8IWV8	1755 aa		28.24	■■■□□ 2.11
CIRBP-222	ENST00000589235	IL6ST	P40189	918 aa	Predicted RBP	28.24	■■■□□ 2.11
CIRBP-222	ENST00000589235	NFIX	Q14938	502 aa		28.24	■■■□□ 2.11
CIRBP-222	ENST00000589235	MCM10	Q7L590	875 aa		28.24	■■■□□ 2.11
CIRBP-222	ENST00000589235	ARHGAP27	Q6ZUM4	889 aa		28.23	■■■□□ 2.11
CIRBP-222	ENST00000589235	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.23	■■■□□ 2.11
CIRBP-222	ENST00000589235	DALRD3	Q5D0E6	543 aa	Known RBP	28.22	■■■□□ 2.11
CIRBP-222	ENST00000589235	SERPINB2	P05120	415 aa		28.21	■■■□□ 2.11
CIRBP-222	ENST00000589235	KCNA3	P22001	575 aa		28.21	■■■□□ 2.11
CIRBP-222	ENST00000589235	RALBP1	Q15311	655 aa		28.21	■■■□□ 2.11
CIRBP-222	ENST00000589235	SNRPA1	P09661	255 aa	Known RBP	28.2	■■■□□ 2.1
CIRBP-222	ENST00000589235	BCL2L12	Q9HB09	334 aa		28.2	■■■□□ 2.1
CIRBP-222	ENST00000589235	KCNQ3	O43525	872 aa		28.19	■■■□□ 2.1
CIRBP-222	ENST00000589235	TAF7	Q15545	349 aa	Predicted RBP	28.19	■■■□□ 2.1
CIRBP-222	ENST00000589235	ADCY9	O60503	1353 aa		28.19	■■■□□ 2.1
CIRBP-222	ENST00000589235	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.19	■■■□□ 2.1
CIRBP-222	ENST00000589235	GOLGB1	Q14789	3259 aa	Known RBP	28.18	■■■□□ 2.1
CIRBP-222	ENST00000589235	A1BG	P04217	495 aa		28.18	■■■□□ 2.1
CIRBP-222	ENST00000589235	DCTN1	Q14203	1278 aa		28.18	■■■□□ 2.1
CIRBP-222	ENST00000589235	PNISR	Q8TF01	805 aa	Known RBP	28.18	■■■□□ 2.1
CIRBP-222	ENST00000589235	SIPA1L3	O60292	1781 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-222	ENST00000589235	BICDL1	Q6ZP65	573 aa		28.17	■■■□□ 2.1
CIRBP-222	ENST00000589235	TBC1D2B	Q9UPU7	963 aa		28.17	■■■□□ 2.1
CIRBP-222	ENST00000589235	KIAA1551	Q9HCM1	1747 aa		28.17	■■■□□ 2.1
CIRBP-222	ENST00000589235	MAPK8IP3	Q9UPT6	1336 aa		28.17	■■■□□ 2.1
CIRBP-222	ENST00000589235	CHRNA5	P30532	468 aa		28.16	■■■□□ 2.1
CIRBP-222	ENST00000589235	ZNF526	Q8TF50	670 aa	Predicted RBP	28.16	■■■□□ 2.1
CIRBP-222	ENST00000589235	USP16	Q9Y5T5	823 aa		28.15	■■■□□ 2.1
CIRBP-222	ENST00000589235	SENP3-EIF4A1	A0A087X0R7	540 aa		28.14	■■■□□ 2.1
CIRBP-222	ENST00000589235	PLEKHF1	Q96S99	279 aa		28.13	■■■□□ 2.09
CIRBP-222	ENST00000589235	PDZRN3	Q9UPQ7	1066 aa		28.13	■■■□□ 2.09
CIRBP-222	ENST00000589235	DDX10	Q13206	875 aa	Known RBP	28.12	■■■□□ 2.09
CIRBP-222	ENST00000589235	NFE2L2	Q16236	605 aa		28.12	■■■□□ 2.09
CIRBP-222	ENST00000589235	TBC1D9B	Q66K14	1250 aa		28.12	■■■□□ 2.09
CIRBP-222	ENST00000589235	DZIP3	Q86Y13	1208 aa	Known RBP	28.12	■■■□□ 2.09
CIRBP-222	ENST00000589235	SETDB2	Q96T68	719 aa		28.12	■■■□□ 2.09
CIRBP-222	ENST00000589235		H0YIN7	160 aa		28.11	■■■□□ 2.09
CIRBP-222	ENST00000589235	NPHP1	O15259	732 aa		28.1	■■■□□ 2.09
CIRBP-222	ENST00000589235	CARMIL3	Q8ND23	1372 aa		28.1	■■■□□ 2.09
CIRBP-222	ENST00000589235	C2CD5	Q86YS7	1000 aa		28.09	■■■□□ 2.09
CIRBP-222	ENST00000589235	ZNF652	Q9Y2D9	606 aa		28.09	■■■□□ 2.09
CIRBP-222	ENST00000589235	CAMTA2	O94983	1202 aa		28.08	■■■□□ 2.09
CIRBP-222	ENST00000589235	PDE6B	P35913	854 aa		28.08	■■■□□ 2.09
CIRBP-222	ENST00000589235	TTLL6	Q8N841	843 aa		28.08	■■■□□ 2.09
CIRBP-222	ENST00000589235	PRAMEF22	A3QJZ6	481 aa		28.07	■■■□□ 2.08
CIRBP-222	ENST00000589235	CLEC4G	Q6UXB4	293 aa		28.07	■■■□□ 2.08
CIRBP-222	ENST00000589235	BRIP1	Q9BX63	1249 aa		28.07	■■■□□ 2.08
CIRBP-222	ENST00000589235	C9orf131	Q5VYM1	1079 aa		28.06	■■■□□ 2.08
CIRBP-222	ENST00000589235	MIS18A	Q9NYP9	233 aa		28.06	■■■□□ 2.08
CIRBP-222	ENST00000589235	ST5	P78524	1137 aa		28.05	■■■□□ 2.08
CIRBP-222	ENST00000589235	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.05	■■■□□ 2.08
CIRBP-222	ENST00000589235	BRCA1	P38398	1863 aa	Known RBP	28.04	■■■□□ 2.08
CIRBP-222	ENST00000589235	NRXN2	Q9P2S2	1712 aa		28.04	■■■□□ 2.08
CIRBP-222	ENST00000589235	RGL2	O15211	777 aa		28.04	■■■□□ 2.08
CIRBP-222	ENST00000589235	PIP4K2A	P48426	406 aa	Predicted RBP	28.04	■■■□□ 2.08
CIRBP-222	ENST00000589235	CNBD1	Q8NA66	436 aa		28.04	■■■□□ 2.08
CIRBP-222	ENST00000589235	PRR5L	Q6MZQ0	368 aa		28.03	■■■□□ 2.08
CIRBP-222	ENST00000589235	RNF181	Q9P0P0	153 aa		28.02	■■■□□ 2.08
CIRBP-222	ENST00000589235	AFDN	P55196	1824 aa	Known RBP	28.02	■■■□□ 2.08
CIRBP-222	ENST00000589235	ARFGEF1	Q9Y6D6	1849 aa		28.02	■■■□□ 2.08
CIRBP-222	ENST00000589235	LMOD3	Q0VAK6	560 aa		28.01	■■■□□ 2.07
CIRBP-222	ENST00000589235	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.01	■■■□□ 2.07
CIRBP-222	ENST00000589235	SCN7A	Q01118	1682 aa		28	■■■□□ 2.07
CIRBP-222	ENST00000589235	RIPK4	P57078	832 aa		28	■■■□□ 2.07
CIRBP-222	ENST00000589235	NBPF26	B4DH59	902 aa		27.99	■■■□□ 2.07
CIRBP-222	ENST00000589235	EIF4A1	P60842	406 aa	Known RBP	27.99	■■■□□ 2.07
CIRBP-222	ENST00000589235	NBPF10	Q6P3W6	841 aa	Known RBP	27.99	■■■□□ 2.07
CIRBP-222	ENST00000589235	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.99	■■■□□ 2.07
CIRBP-222	ENST00000589235	NBPF15	Q8N660	670 aa		27.99	■■■□□ 2.07
CIRBP-222	ENST00000589235	THUMPD2	Q9BTF0	503 aa	Known RBP	27.98	■■■□□ 2.07
CIRBP-222	ENST00000589235	KDM2B	Q8NHM5	1336 aa		27.97	■■■□□ 2.07
CIRBP-222	ENST00000589235	KIF3C	O14782	793 aa		27.97	■■■□□ 2.07
CIRBP-222	ENST00000589235	WDR43	Q15061	677 aa	Known RBP eCLIP	27.97	■■■□□ 2.07
CIRBP-222	ENST00000589235	TPTE2	Q6XPS3	522 aa		27.97	■■■□□ 2.07
CIRBP-222	ENST00000589235	CCDC24	Q8N4L8	307 aa		27.96	■■■□□ 2.07
CIRBP-222	ENST00000589235	CNKSR1	Q969H4	720 aa		27.96	■■■□□ 2.07
CIRBP-222	ENST00000589235	BABAM1	Q9NWV8	329 aa		27.96	■■■□□ 2.07
CIRBP-222	ENST00000589235	TSPYL4	Q9UJ04	414 aa		27.96	■■■□□ 2.07
CIRBP-222	ENST00000589235	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.95	■■■□□ 2.06
CIRBP-222	ENST00000589235	LMNB1	P20700	586 aa		27.94	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms