RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 FKBP8Q14318 412 aa22.97■■□□□ 1.27
DNMT1-215ENST00000588913 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
DNMT1-215ENST00000588913 MSL1Q68DK7 614 aa22.96■■□□□ 1.27
DNMT1-215ENST00000588913 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
DNMT1-215ENST00000588913 MSH5O43196 834 aa22.96■■□□□ 1.27
DNMT1-215ENST00000588913 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
DNMT1-215ENST00000588913 EIF4A1P60842 406 aaKnown RBP22.96■■□□□ 1.27
DNMT1-215ENST00000588913 LMOD3Q0VAK6 560 aa22.96■■□□□ 1.27
DNMT1-215ENST00000588913 SSFA2P28290 1259 aa22.95■■□□□ 1.26
DNMT1-215ENST00000588913 PIP4K2AP48426 406 aaPredicted RBP22.95■■□□□ 1.26
DNMT1-215ENST00000588913 MTFR1LQ9H019 292 aa22.95■■□□□ 1.26
DNMT1-215ENST00000588913 CCDC87Q9NVE4 849 aa22.95■■□□□ 1.26
DNMT1-215ENST00000588913 KRT24Q2M2I5 525 aa22.94■■□□□ 1.26
DNMT1-215ENST00000588913 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
DNMT1-215ENST00000588913 A1BGP04217 495 aa22.94■■□□□ 1.26
DNMT1-215ENST00000588913 ARHGEF1Q92888 912 aaKnown RBP22.94■■□□□ 1.26
DNMT1-215ENST00000588913 TSPYL4Q9UJ04 414 aa22.94■■□□□ 1.26
DNMT1-215ENST00000588913 RTCBQ9Y3I0 505 aaKnown RBP22.94■■□□□ 1.26
DNMT1-215ENST00000588913 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
DNMT1-215ENST00000588913 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
DNMT1-215ENST00000588913 CHL1O00533 1208 aa22.92■■□□□ 1.26
DNMT1-215ENST00000588913 CANXP27824 592 aaKnown RBP22.91■■□□□ 1.26
DNMT1-215ENST00000588913 ERICH6BQ5W0A0 696 aa22.91■■□□□ 1.26
DNMT1-215ENST00000588913 SRP68Q9UHB9 627 aaKnown RBP22.91■■□□□ 1.26
DNMT1-215ENST00000588913 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
DNMT1-215ENST00000588913 GIGYF1O75420 1035 aaPredicted RBP22.9■■□□□ 1.26
DNMT1-215ENST00000588913 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
DNMT1-215ENST00000588913 ZNF853P0CG23 659 aa22.9■■□□□ 1.26
DNMT1-215ENST00000588913 SLC16A10Q8TF71 515 aa22.9■■□□□ 1.26
DNMT1-215ENST00000588913 NBPF26B4DH59 902 aa22.89■■□□□ 1.26
DNMT1-215ENST00000588913 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.26
DNMT1-215ENST00000588913 NBPF10Q6P3W6 841 aaKnown RBP22.89■■□□□ 1.26
DNMT1-215ENST00000588913 NBPF15Q8N660 670 aa22.89■■□□□ 1.26
DNMT1-215ENST00000588913 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
DNMT1-215ENST00000588913 FLAD1Q8NFF5 587 aa22.89■■□□□ 1.25
DNMT1-215ENST00000588913 COL15A1P39059 1388 aa22.88■■□□□ 1.25
DNMT1-215ENST00000588913 MBIPQ9NS73 344 aa22.88■■□□□ 1.25
DNMT1-215ENST00000588913 STARD3NLO95772 234 aa22.87■■□□□ 1.25
DNMT1-215ENST00000588913 EIF5P55010 431 aaKnown RBP22.87■■□□□ 1.25
DNMT1-215ENST00000588913 CFAP44Q96MT7 982 aa22.86■■□□□ 1.25
DNMT1-215ENST00000588913 GYS1P13807 737 aa22.86■■□□□ 1.25
DNMT1-215ENST00000588913 HMGB2P26583 209 aaKnown RBP22.86■■□□□ 1.25
DNMT1-215ENST00000588913 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
DNMT1-215ENST00000588913 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
DNMT1-215ENST00000588913 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
DNMT1-215ENST00000588913 USP42Q9H9J4 1324 aaKnown RBP22.85■■□□□ 1.25
DNMT1-215ENST00000588913 ADRA2BP18089 450 aa22.85■■□□□ 1.25
DNMT1-215ENST00000588913 BCL2L12Q9HB09 334 aa22.85■■□□□ 1.25
DNMT1-215ENST00000588913 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
DNMT1-215ENST00000588913 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
DNMT1-215ENST00000588913 RFC4P35249 363 aa22.84■■□□□ 1.25
DNMT1-215ENST00000588913 IFT57Q9NWB7 429 aa22.83■■□□□ 1.24
DNMT1-215ENST00000588913 BCORQ6W2J9 1755 aa22.82■■□□□ 1.24
DNMT1-215ENST00000588913 USPL1Q5W0Q7 1092 aa22.82■■□□□ 1.24
DNMT1-215ENST00000588913 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
DNMT1-215ENST00000588913 ZNF330Q9Y3S2 320 aaPredicted RBP22.82■■□□□ 1.24
DNMT1-215ENST00000588913 IL6STP40189 918 aaPredicted RBP22.81■■□□□ 1.24
DNMT1-215ENST00000588913 NECTIN2Q92692 538 aa22.81■■□□□ 1.24
DNMT1-215ENST00000588913 ARXQ96QS3 562 aa22.81■■□□□ 1.24
DNMT1-215ENST00000588913 TBC1D2BQ9UPU7 963 aa22.81■■□□□ 1.24
DNMT1-215ENST00000588913 ANXA1P04083 346 aa22.8■■□□□ 1.24
DNMT1-215ENST00000588913 PROSER3Q2NL68 480 aa22.8■■□□□ 1.24
DNMT1-215ENST00000588913 GNAI1P63096 354 aa22.79■■□□□ 1.24
DNMT1-215ENST00000588913 PDIA6Q15084 440 aa22.79■■□□□ 1.24
DNMT1-215ENST00000588913 NARFQ9UHQ1 456 aa22.79■■□□□ 1.24
DNMT1-215ENST00000588913 EIF2S2P20042 333 aaKnown RBP22.78■■□□□ 1.24
DNMT1-215ENST00000588913 NCBP3Q53F19 620 aaKnown RBP22.78■■□□□ 1.24
DNMT1-215ENST00000588913 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
DNMT1-215ENST00000588913 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
DNMT1-215ENST00000588913 FHDC1Q9C0D6 1143 aaPredicted RBP22.78■■□□□ 1.24
DNMT1-215ENST00000588913 PPP1R1BQ9UD71 204 aaPredicted RBP22.78■■□□□ 1.24
DNMT1-215ENST00000588913 ZNF521Q96K83 1311 aa22.78■■□□□ 1.24
DNMT1-215ENST00000588913 MMP10P09238 476 aa22.78■■□□□ 1.24
DNMT1-215ENST00000588913 DDR1Q08345 913 aa22.78■■□□□ 1.24
DNMT1-215ENST00000588913 TSPYL6Q8N831 410 aa22.77■■□□□ 1.24
DNMT1-215ENST00000588913 GOLGB1Q14789 3259 aaKnown RBP22.77■■□□□ 1.24
DNMT1-215ENST00000588913 ELL2O00472 640 aaPredicted RBP22.76■■□□□ 1.23
DNMT1-215ENST00000588913 CAMTA2O94983 1202 aa22.76■■□□□ 1.23
DNMT1-215ENST00000588913 POLD1P28340 1107 aa22.76■■□□□ 1.23
DNMT1-215ENST00000588913 MYL6BP14649 208 aa22.76■■□□□ 1.23
DNMT1-215ENST00000588913 DUSP27Q5VZP5 1158 aa22.76■■□□□ 1.23
DNMT1-215ENST00000588913 NGEFQ8N5V2 710 aa22.76■■□□□ 1.23
DNMT1-215ENST00000588913 AFDNP55196 1824 aaKnown RBP22.75■■□□□ 1.23
DNMT1-215ENST00000588913 ANP32EQ9BTT0 268 aa22.75■■□□□ 1.23
DNMT1-215ENST00000588913 CALD1Q05682 793 aaKnown RBP22.74■■□□□ 1.23
DNMT1-215ENST00000588913 TTLL7Q6ZT98 887 aa22.74■■□□□ 1.23
DNMT1-215ENST00000588913 KIAA1551Q9HCM1 1747 aa22.74■■□□□ 1.23
DNMT1-215ENST00000588913 ZPR1O75312 459 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 TM4SF1P30408 202 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
DNMT1-215ENST00000588913 DZIP3Q86Y13 1208 aaKnown RBP22.73■■□□□ 1.23
DNMT1-215ENST00000588913 NLGN1Q8N2Q7 840 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 SYT17Q9BSW7 474 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 IL16Q14005 1332 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 FANCIQ9NVI1 1328 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 NFIXQ14938 502 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
DNMT1-215ENST00000588913 UTRNP46939 3433 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms