RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZBTB7BO15156 539 aaPredicted RBP14.43□□□□□ -0.1
SMAD4-205ENST00000588745 CCT4P50991 539 aaKnown RBP14.43□□□□□ -0.1
SMAD4-205ENST00000588745 AFF2P51816 1311 aa14.42□□□□□ -0.1
SMAD4-205ENST00000588745 F6X3S4 739 aa14.42□□□□□ -0.1
SMAD4-205ENST00000588745 FAM98CQ17RN3 349 aaKnown RBP14.42□□□□□ -0.1
SMAD4-205ENST00000588745 DDX21Q9NR30 783 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMAD4-205ENST00000588745 ATRNO75882 1429 aa14.41□□□□□ -0.1
SMAD4-205ENST00000588745 ANXA1P04083 346 aa14.41□□□□□ -0.1
SMAD4-205ENST00000588745 PROSER3Q2NL68 480 aa14.41□□□□□ -0.1
SMAD4-205ENST00000588745 PIGBQ92521 554 aa14.41□□□□□ -0.1
SMAD4-205ENST00000588745 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
SMAD4-205ENST00000588745 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
SMAD4-205ENST00000588745 IGHDP01880 384 aa14.4□□□□□ -0.1
SMAD4-205ENST00000588745 PDIA6Q15084 440 aa14.4□□□□□ -0.1
SMAD4-205ENST00000588745 SLC4A10Q6U841 1118 aa14.4□□□□□ -0.1
SMAD4-205ENST00000588745 MARCH10Q8NA82 808 aaPredicted RBP14.4□□□□□ -0.1
SMAD4-205ENST00000588745 ATP10DQ9P241 1426 aa14.39□□□□□ -0.11
SMAD4-205ENST00000588745 ADCY9O60503 1353 aa14.39□□□□□ -0.11
SMAD4-205ENST00000588745 HDAC1Q13547 482 aaPredicted RBP14.39□□□□□ -0.11
SMAD4-205ENST00000588745 RWDD1Q9H446 243 aaPredicted RBP14.39□□□□□ -0.11
SMAD4-205ENST00000588745 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
SMAD4-205ENST00000588745 DNAAF4Q8WXU2 420 aa14.38□□□□□ -0.11
SMAD4-205ENST00000588745 PTCD1O75127 700 aaKnown RBP14.37□□□□□ -0.11
SMAD4-205ENST00000588745 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
SMAD4-205ENST00000588745 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
SMAD4-205ENST00000588745 ATG3Q9NT62 314 aa14.37□□□□□ -0.11
SMAD4-205ENST00000588745 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
SMAD4-205ENST00000588745 ASAP1Q9ULH1 1129 aa14.37□□□□□ -0.11
SMAD4-205ENST00000588745 TJP1Q07157 1748 aa14.37□□□□□ -0.11
SMAD4-205ENST00000588745 CICQ96RK0 1608 aaPredicted RBP14.37□□□□□ -0.11
SMAD4-205ENST00000588745 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
SMAD4-205ENST00000588745 PRIM1P49642 420 aaKnown RBP14.36□□□□□ -0.11
SMAD4-205ENST00000588745 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
SMAD4-205ENST00000588745 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
SMAD4-205ENST00000588745 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
SMAD4-205ENST00000588745 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
SMAD4-205ENST00000588745 MEIS3Q99687 375 aa14.36□□□□□ -0.11
SMAD4-205ENST00000588745 A0A0G2JS52 829 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
SMAD4-205ENST00000588745 MYL6BP14649 208 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 MYT1Q01538 1121 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 SRCIN1Q9C0H9 1055 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 ARFGEF2Q9Y6D5 1785 aa14.35□□□□□ -0.11
SMAD4-205ENST00000588745 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 MAP3K2Q9Y2U5 619 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 NHSQ6T4R5 1651 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 NUP188Q5SRE5 1749 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 ACSBG1Q96GR2 724 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
SMAD4-205ENST00000588745 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
SMAD4-205ENST00000588745 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
SMAD4-205ENST00000588745 GNAI3P08754 354 aa14.33□□□□□ -0.12
SMAD4-205ENST00000588745 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.12
SMAD4-205ENST00000588745 AIMP1Q12904 312 aaKnown RBP14.33□□□□□ -0.12
SMAD4-205ENST00000588745 NBPF14Q5TI25 921 aa14.33□□□□□ -0.12
SMAD4-205ENST00000588745 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
SMAD4-205ENST00000588745 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
SMAD4-205ENST00000588745 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
SMAD4-205ENST00000588745 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
SMAD4-205ENST00000588745 IBTKQ9P2D0 1353 aaPredicted RBP14.32□□□□□ -0.12
SMAD4-205ENST00000588745 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 COPS6Q7L5N1 327 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
SMAD4-205ENST00000588745 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
SMAD4-205ENST00000588745 ZNF831Q5JPB2 1677 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
SMAD4-205ENST00000588745 A1BGP04217 495 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 GNAI2P04899 355 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 RIC3Q7Z5B4 369 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 SLC4A9Q96Q91 983 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 RREB1Q92766 1687 aa14.31□□□□□ -0.12
SMAD4-205ENST00000588745 PALLDQ8WX93 1383 aa14.3□□□□□ -0.12
SMAD4-205ENST00000588745 STARD3NLO95772 234 aa14.3□□□□□ -0.12
SMAD4-205ENST00000588745 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
SMAD4-205ENST00000588745 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
SMAD4-205ENST00000588745 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
SMAD4-205ENST00000588745 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
SMAD4-205ENST00000588745 AFDNP55196 1824 aaKnown RBP14.3□□□□□ -0.12
SMAD4-205ENST00000588745 BTAF1O14981 1849 aa14.29□□□□□ -0.12
SMAD4-205ENST00000588745 ANKRD13DQ6ZTN6 518 aa14.29□□□□□ -0.12
SMAD4-205ENST00000588745 SMARCC1Q92922 1105 aaPredicted RBP14.29□□□□□ -0.12
SMAD4-205ENST00000588745 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
SMAD4-205ENST00000588745 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
SMAD4-205ENST00000588745 QTRT2Q9H974 415 aaKnown RBP14.29□□□□□ -0.12
SMAD4-205ENST00000588745 COL5A3P25940 1745 aaPredicted RBP14.28□□□□□ -0.12
SMAD4-205ENST00000588745 CYP19A1P11511 503 aaPredicted RBP14.28□□□□□ -0.12
SMAD4-205ENST00000588745 NEXNQ0ZGT2 675 aa14.28□□□□□ -0.12
SMAD4-205ENST00000588745 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
SMAD4-205ENST00000588745 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
SMAD4-205ENST00000588745 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
SMAD4-205ENST00000588745 SBF2Q86WG5 1849 aa14.28□□□□□ -0.12
SMAD4-205ENST00000588745 KCNQ2O43526 872 aa14.27□□□□□ -0.12
SMAD4-205ENST00000588745 HMMRO75330 724 aa14.27□□□□□ -0.12
SMAD4-205ENST00000588745 IGKV5-2P06315 115 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms