RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CAPN15O75808 1086 aa20.93■□□□□ 0.94
IFT20-216ENST00000588477 DICER1Q9UPY3 1922 aaKnown RBP20.92■□□□□ 0.94
IFT20-216ENST00000588477 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
IFT20-216ENST00000588477 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
IFT20-216ENST00000588477 ZC3H4Q9UPT8 1303 aaKnown RBP20.9■□□□□ 0.94
IFT20-216ENST00000588477 LMNB1P20700 586 aa20.9■□□□□ 0.94
IFT20-216ENST00000588477 NFIXQ14938 502 aa20.9■□□□□ 0.94
IFT20-216ENST00000588477 TNS4Q8IZW8 715 aa20.9■□□□□ 0.94
IFT20-216ENST00000588477 SLC52A2Q9HAB3 445 aa20.9■□□□□ 0.94
IFT20-216ENST00000588477 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
IFT20-216ENST00000588477 GLTPD2A6NH11 291 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 CYP19A1P11511 503 aaPredicted RBP20.89■□□□□ 0.93
IFT20-216ENST00000588477 VEGFAP15692 232 aaPredicted RBP20.89■□□□□ 0.93
IFT20-216ENST00000588477 PRELPP51888 382 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 SLC39A6Q13433 755 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 AKAP4Q5JQC9 854 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 NARFQ9UHQ1 456 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 TIMELESSQ9UNS1 1208 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 CACNA1SQ13698 1873 aa20.89■□□□□ 0.93
IFT20-216ENST00000588477 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
IFT20-216ENST00000588477 COL15A1P39059 1388 aa20.88■□□□□ 0.93
IFT20-216ENST00000588477 SERPINB2P05120 415 aa20.88■□□□□ 0.93
IFT20-216ENST00000588477 IL13P35225 146 aa20.87■□□□□ 0.93
IFT20-216ENST00000588477 TTLL6Q8N841 843 aa20.87■□□□□ 0.93
IFT20-216ENST00000588477 FER1L6Q2WGJ9 1857 aa20.86■□□□□ 0.93
IFT20-216ENST00000588477 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
IFT20-216ENST00000588477 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
IFT20-216ENST00000588477 UBR2Q8IWV8 1755 aa20.86■□□□□ 0.93
IFT20-216ENST00000588477 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
IFT20-216ENST00000588477 C2CD5Q86YS7 1000 aa20.85■□□□□ 0.93
IFT20-216ENST00000588477 MRC1P22897 1456 aa20.85■□□□□ 0.93
IFT20-216ENST00000588477 H0YIN7 160 aa20.84■□□□□ 0.93
IFT20-216ENST00000588477 HSPA1AP0DMV8 641 aaKnown RBP20.83■□□□□ 0.93
IFT20-216ENST00000588477 HSPA1BP0DMV9 641 aaKnown RBP20.83■□□□□ 0.93
IFT20-216ENST00000588477 HSPA5P11021 654 aaKnown RBP20.83■□□□□ 0.93
IFT20-216ENST00000588477 EIF4G2P78344 907 aaKnown RBP eCLIP20.83■□□□□ 0.93
IFT20-216ENST00000588477 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.92
IFT20-216ENST00000588477 NFKBIEO00221 500 aa20.82■□□□□ 0.92
IFT20-216ENST00000588477 CANXP27824 592 aaKnown RBP20.82■□□□□ 0.92
IFT20-216ENST00000588477 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
IFT20-216ENST00000588477 BICDL1Q6ZP65 573 aa20.82■□□□□ 0.92
IFT20-216ENST00000588477 POTECB2RU33 542 aa20.81■□□□□ 0.92
IFT20-216ENST00000588477 HMOX1P09601 288 aa20.81■□□□□ 0.92
IFT20-216ENST00000588477 COL11A2P13942 1736 aaPredicted RBP20.81■□□□□ 0.92
IFT20-216ENST00000588477 DPY19L2Q6NUT2 758 aa20.8■□□□□ 0.92
IFT20-216ENST00000588477 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
IFT20-216ENST00000588477 VSIG10Q8N0Z9 540 aa20.79■□□□□ 0.92
IFT20-216ENST00000588477 ZNF219Q9P2Y4 722 aaPredicted RBP20.79■□□□□ 0.92
IFT20-216ENST00000588477 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
IFT20-216ENST00000588477 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.922e-6■□□□□ 8.4
IFT20-216ENST00000588477 SLX4Q8IY92 1834 aa20.78■□□□□ 0.92
IFT20-216ENST00000588477 SCN7AQ01118 1682 aa20.77■□□□□ 0.92
IFT20-216ENST00000588477 C21orf2O43822 256 aa20.76■□□□□ 0.91
IFT20-216ENST00000588477 EIF5P55010 431 aaKnown RBP20.76■□□□□ 0.91
IFT20-216ENST00000588477 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
IFT20-216ENST00000588477 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
IFT20-216ENST00000588477 SIPA1L3O60292 1781 aaPredicted RBP20.76■□□□□ 0.91
IFT20-216ENST00000588477 ARFGEF2Q9Y6D5 1785 aa20.75■□□□□ 0.91
IFT20-216ENST00000588477 STARD3NLO95772 234 aa20.75■□□□□ 0.91
IFT20-216ENST00000588477 CCDC24Q8N4L8 307 aa20.75■□□□□ 0.91
IFT20-216ENST00000588477 A0A087WZG4 1122 aa20.74■□□□□ 0.91
IFT20-216ENST00000588477 PDE6BP35913 854 aa20.74■□□□□ 0.91
IFT20-216ENST00000588477 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
IFT20-216ENST00000588477 BRIP1Q9BX63 1249 aa20.73■□□□□ 0.91
IFT20-216ENST00000588477 PDZRN3Q9UPQ7 1066 aa20.73■□□□□ 0.91
IFT20-216ENST00000588477 TBC1D2BQ9UPU7 963 aa20.73■□□□□ 0.91
IFT20-216ENST00000588477 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
IFT20-216ENST00000588477 PRR5LQ6MZQ0 368 aa20.72■□□□□ 0.91
IFT20-216ENST00000588477 SCN4AP35499 1836 aa20.71■□□□□ 0.91
IFT20-216ENST00000588477 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
IFT20-216ENST00000588477 CHADLQ6NUI6 762 aa20.71■□□□□ 0.91
IFT20-216ENST00000588477 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
IFT20-216ENST00000588477 MKRN1Q9UHC7 482 aaKnown RBP20.71■□□□□ 0.91
IFT20-216ENST00000588477 BCORQ6W2J9 1755 aa20.71■□□□□ 0.91
IFT20-216ENST00000588477 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
IFT20-216ENST00000588477 DIAPH1O60610 1272 aaKnown RBP20.7■□□□□ 0.9
IFT20-216ENST00000588477 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
IFT20-216ENST00000588477 POTEIP0CG38 1075 aa20.7■□□□□ 0.9
IFT20-216ENST00000588477 POTEJP0CG39 1038 aa20.7■□□□□ 0.9
IFT20-216ENST00000588477 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
IFT20-216ENST00000588477 CREBZFQ9NS37 354 aa20.7■□□□□ 0.9
IFT20-216ENST00000588477 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
IFT20-216ENST00000588477 HEG1Q9ULI3 1381 aa20.69■□□□□ 0.9
IFT20-216ENST00000588477 NPHP1O15259 732 aa20.68■□□□□ 0.9
IFT20-216ENST00000588477 TEFQ10587 303 aa20.68■□□□□ 0.9
IFT20-216ENST00000588477 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
IFT20-216ENST00000588477 TEX13AQ9BXU3 409 aaPredicted RBP20.68■□□□□ 0.9
IFT20-216ENST00000588477 LTBP3Q9NS15 1303 aa20.68■□□□□ 0.9
IFT20-216ENST00000588477 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
IFT20-216ENST00000588477 CNKSR1Q969H4 720 aa20.67■□□□□ 0.9
IFT20-216ENST00000588477 SETDB2Q96T68 719 aa20.67■□□□□ 0.9
IFT20-216ENST00000588477 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
IFT20-216ENST00000588477 CNBD1Q8NA66 436 aa20.66■□□□□ 0.9
IFT20-216ENST00000588477 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
IFT20-216ENST00000588477 A1BGP04217 495 aa20.65■□□□□ 0.9
IFT20-216ENST00000588477 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
IFT20-216ENST00000588477 GNAT3A8MTJ3 354 aa20.64■□□□□ 0.89
IFT20-216ENST00000588477 SRGNP10124 158 aa20.64■□□□□ 0.89
IFT20-216ENST00000588477 ST5P78524 1137 aa20.64■□□□□ 0.89
IFT20-216ENST00000588477 STYK1Q6J9G0 422 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms