RNA–Protein interactions for RNA: ENST00000587896.5

CIRBP-214, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-214ENST00000587896 PARP3Q9Y6F1 533 aa27.35■■□□□ 1.97
CIRBP-214ENST00000587896 GRIN3BO60391 1043 aa27.34■■□□□ 1.97
CIRBP-214ENST00000587896 NEFMP07197 916 aa27.34■■□□□ 1.97
CIRBP-214ENST00000587896 CANXP27824 592 aaKnown RBP27.34■■□□□ 1.97
CIRBP-214ENST00000587896 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
CIRBP-214ENST00000587896 PXDNLA1KZ92 1463 aa27.33■■□□□ 1.97
CIRBP-214ENST00000587896 KIF13BQ9NQT8 1826 aa27.33■■□□□ 1.97
CIRBP-214ENST00000587896 ZPR1O75312 459 aa27.33■■□□□ 1.97
CIRBP-214ENST00000587896 TEX13AQ9BXU3 409 aaPredicted RBP27.33■■□□□ 1.97
CIRBP-214ENST00000587896 WWC3Q9ULE0 1092 aa27.33■■□□□ 1.97
CIRBP-214ENST00000587896 MYBBP1AQ9BQG0 1328 aaKnown RBP27.33■■□□□ 1.97
CIRBP-214ENST00000587896 GOLGB1Q14789 3259 aaKnown RBP27.32■■□□□ 1.96
CIRBP-214ENST00000587896 CHD4Q14839 1912 aa27.32■■□□□ 1.96
CIRBP-214ENST00000587896 DDR1Q08345 913 aa27.32■■□□□ 1.96
CIRBP-214ENST00000587896 NARFQ9UHQ1 456 aa27.32■■□□□ 1.96
CIRBP-214ENST00000587896 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
CIRBP-214ENST00000587896 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
CIRBP-214ENST00000587896 TM4SF1P30408 202 aa27.29■■□□□ 1.96
CIRBP-214ENST00000587896 TGFB2P61812 414 aa27.29■■□□□ 1.96
CIRBP-214ENST00000587896 NFE2L2Q16236 605 aa27.29■■□□□ 1.96
CIRBP-214ENST00000587896 BCL2L12Q9HB09 334 aa27.29■■□□□ 1.96
CIRBP-214ENST00000587896 MAPK8IP3Q9UPT6 1336 aa27.28■■□□□ 1.96
CIRBP-214ENST00000587896 ZNF784Q8NCA9 323 aaPredicted RBP27.28■■□□□ 1.96
CIRBP-214ENST00000587896 PNNQ9H307 717 aaKnown RBP27.28■■□□□ 1.96
CIRBP-214ENST00000587896 POLRMTO00411 1230 aaKnown RBP27.27■■□□□ 1.96
CIRBP-214ENST00000587896 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-214ENST00000587896 DLG5Q8TDM6 1919 aa27.26■■□□□ 1.95
CIRBP-214ENST00000587896 PRAMEF22A3QJZ6 481 aa27.26■■□□□ 1.95
CIRBP-214ENST00000587896 A1BGP04217 495 aa27.26■■□□□ 1.95
CIRBP-214ENST00000587896 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
CIRBP-214ENST00000587896 NFIXQ14938 502 aa27.25■■□□□ 1.95
CIRBP-214ENST00000587896 USP16Q9Y5T5 823 aa27.25■■□□□ 1.95
CIRBP-214ENST00000587896 A0A087WZG4 1122 aa27.24■■□□□ 1.95
CIRBP-214ENST00000587896 IL6STP40189 918 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-214ENST00000587896 MIS18AQ9NYP9 233 aa27.24■■□□□ 1.95
CIRBP-214ENST00000587896 ZNF330Q9Y3S2 320 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-214ENST00000587896 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-214ENST00000587896 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
CIRBP-214ENST00000587896 DPEP1P16444 411 aa27.23■■□□□ 1.95
CIRBP-214ENST00000587896 THUMPD2Q9BTF0 503 aaKnown RBP27.23■■□□□ 1.95
CIRBP-214ENST00000587896 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
CIRBP-214ENST00000587896 SCN7AQ01118 1682 aa27.21■■□□□ 1.95
CIRBP-214ENST00000587896 PIP4K2AP48426 406 aaPredicted RBP27.2■■□□□ 1.94
CIRBP-214ENST00000587896 TBC1D2BQ9UPU7 963 aa27.2■■□□□ 1.94
CIRBP-214ENST00000587896 KCNA3P22001 575 aa27.19■■□□□ 1.94
CIRBP-214ENST00000587896 PNISRQ8TF01 805 aaKnown RBP27.19■■□□□ 1.94
CIRBP-214ENST00000587896 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
CIRBP-214ENST00000587896 BCS1LQ9Y276 419 aa27.18■■□□□ 1.94
CIRBP-214ENST00000587896 NRXN2Q9P2S2 1712 aa27.18■■□□□ 1.94
CIRBP-214ENST00000587896 SERPINB2P05120 415 aa27.17■■□□□ 1.94
CIRBP-214ENST00000587896 BICDL1Q6ZP65 573 aa27.17■■□□□ 1.94
CIRBP-214ENST00000587896 RIPK4P57078 832 aa27.16■■□□□ 1.94
CIRBP-214ENST00000587896 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
CIRBP-214ENST00000587896 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
CIRBP-214ENST00000587896 CAMTA2O94983 1202 aa27.15■■□□□ 1.94
CIRBP-214ENST00000587896 TMPOP42166 694 aaKnown RBP27.15■■□□□ 1.94
CIRBP-214ENST00000587896 CCDC146Q8IYE0 955 aa27.15■■□□□ 1.94
CIRBP-214ENST00000587896 AFDNP55196 1824 aaKnown RBP27.15■■□□□ 1.94
CIRBP-214ENST00000587896 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
CIRBP-214ENST00000587896 NBPF26B4DH59 902 aa27.14■■□□□ 1.94
CIRBP-214ENST00000587896 CHRNA5P30532 468 aa27.14■■□□□ 1.94
CIRBP-214ENST00000587896 WDR43Q15061 677 aaKnown RBP eCLIP27.14■■□□□ 1.94
CIRBP-214ENST00000587896 NBPF10Q6P3W6 841 aaKnown RBP27.14■■□□□ 1.94
CIRBP-214ENST00000587896 DZIP3Q86Y13 1208 aaKnown RBP27.14■■□□□ 1.94
CIRBP-214ENST00000587896 NBPF15Q8N660 670 aa27.14■■□□□ 1.94
CIRBP-214ENST00000587896 EIF4A1P60842 406 aaKnown RBP27.13■■□□□ 1.93
CIRBP-214ENST00000587896 LAMB4A4D0S4 1761 aa27.12■■□□□ 1.93
CIRBP-214ENST00000587896 CARMIL3Q8ND23 1372 aa27.12■■□□□ 1.93
CIRBP-214ENST00000587896 PIM2Q9P1W9 311 aa27.12■■□□□ 1.93
CIRBP-214ENST00000587896 RRP7AQ9Y3A4 280 aaKnown RBP27.12■■□□□ 1.93
CIRBP-214ENST00000587896 BCORQ6W2J9 1755 aa27.12■■□□□ 1.93
CIRBP-214ENST00000587896 ADCY9O60503 1353 aa27.11■■□□□ 1.93
CIRBP-214ENST00000587896 GIGYF1O75420 1035 aaPredicted RBP27.11■■□□□ 1.93
CIRBP-214ENST00000587896 ADAMTS8Q9UP79 889 aa27.11■■□□□ 1.93
CIRBP-214ENST00000587896 RUNDC1Q96C34 613 aa27.1■■□□□ 1.93
CIRBP-214ENST00000587896 ATP10DQ9P241 1426 aa27.09■■□□□ 1.93
CIRBP-214ENST00000587896 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
CIRBP-214ENST00000587896 TSPYL4Q9UJ04 414 aa27.08■■□□□ 1.93
CIRBP-214ENST00000587896 NEUROD2Q15784 382 aa27.07■■□□□ 1.92
CIRBP-214ENST00000587896 DALRD3Q5D0E6 543 aaKnown RBP27.07■■□□□ 1.92
CIRBP-214ENST00000587896 PRR5LQ6MZQ0 368 aa27.06■■□□□ 1.92
CIRBP-214ENST00000587896 ARHGAP27Q6ZUM4 889 aa27.05■■□□□ 1.92
CIRBP-214ENST00000587896 SETDB2Q96T68 719 aa27.05■■□□□ 1.92
CIRBP-214ENST00000587896 ARFGEF1Q9Y6D6 1849 aa27.04■■□□□ 1.92
CIRBP-214ENST00000587896 CLEC4GQ6UXB4 293 aa27.04■■□□□ 1.92
CIRBP-214ENST00000587896 CCDC24Q8N4L8 307 aa27.03■■□□□ 1.92
CIRBP-214ENST00000587896 BABAM1Q9NWV8 329 aa27.03■■□□□ 1.92
CIRBP-214ENST00000587896 TRIM35Q9UPQ4 493 aa27.03■■□□□ 1.92
CIRBP-214ENST00000587896 C2CD5Q86YS7 1000 aa27.02■■□□□ 1.92
CIRBP-214ENST00000587896 ZNF652Q9Y2D9 606 aa27.02■■□□□ 1.92
CIRBP-214ENST00000587896 DLEC1Q9Y238 1755 aa27.02■■□□□ 1.92
CIRBP-214ENST00000587896 CNBD1Q8NA66 436 aa27.01■■□□□ 1.91
CIRBP-214ENST00000587896 ANKRD31Q8N7Z5 1873 aa27■■□□□ 1.91
CIRBP-214ENST00000587896 ZNF316A6NFI3 1004 aaPredicted RBP27■■□□□ 1.91
CIRBP-214ENST00000587896 RGL2O15211 777 aa27■■□□□ 1.91
CIRBP-214ENST00000587896 NGEFQ8N5V2 710 aa27■■□□□ 1.91
CIRBP-214ENST00000587896 BRIP1Q9BX63 1249 aa27■■□□□ 1.91
CIRBP-214ENST00000587896 H0YIN7 160 aa26.99■■□□□ 1.91
CIRBP-214ENST00000587896 HLFQ16534 295 aa26.99■■□□□ 1.91
CIRBP-214ENST00000587896 MYL6BP14649 208 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms