RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 DALRD3Q5D0E6 543 aaKnown RBP21.15■□□□□ 0.98
VAT1-205ENST00000587173 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
VAT1-205ENST00000587173 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.97
VAT1-205ENST00000587173 NFIXQ14938 502 aa21.13■□□□□ 0.97
VAT1-205ENST00000587173 C9orf131Q5VYM1 1079 aa21.13■□□□□ 0.97
VAT1-205ENST00000587173 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
VAT1-205ENST00000587173 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
VAT1-205ENST00000587173 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
VAT1-205ENST00000587173 CANXP27824 592 aaKnown RBP21.12■□□□□ 0.97
VAT1-205ENST00000587173 TEFQ10587 303 aa21.11■□□□□ 0.97
VAT1-205ENST00000587173 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
VAT1-205ENST00000587173 STARD3NLO95772 234 aa21.1■□□□□ 0.97
VAT1-205ENST00000587173 IL17REQ8NFR9 667 aa21.1■□□□□ 0.97
VAT1-205ENST00000587173 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
VAT1-205ENST00000587173 ZNF790Q6PG37 636 aa21.09■□□□□ 0.97
VAT1-205ENST00000587173 ZNF496Q96IT1 587 aaPredicted RBP21.09■□□□□ 0.97
VAT1-205ENST00000587173 NMRK2Q9NPI5 230 aa21.09■□□□□ 0.97
VAT1-205ENST00000587173 UBR2Q8IWV8 1755 aa21.08■□□□□ 0.97
VAT1-205ENST00000587173 TOMM70O94826 608 aa21.08■□□□□ 0.97
VAT1-205ENST00000587173 SERPINB2P05120 415 aa21.08■□□□□ 0.97
VAT1-205ENST00000587173 RNF181Q9P0P0 153 aa21.08■□□□□ 0.97
VAT1-205ENST00000587173 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.96
VAT1-205ENST00000587173 ARFGEF1Q9Y6D6 1849 aa21.08■□□□□ 0.96
VAT1-205ENST00000587173 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.96
VAT1-205ENST00000587173 EIF5P55010 431 aaKnown RBP21.07■□□□□ 0.96
VAT1-205ENST00000587173 CFAP53Q96M91 514 aa21.07■□□□□ 0.96
VAT1-205ENST00000587173 A0A087WZG4 1122 aa21.06■□□□□ 0.96
VAT1-205ENST00000587173 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
VAT1-205ENST00000587173 BICDL1Q6ZP65 573 aa21.06■□□□□ 0.96
VAT1-205ENST00000587173 TEX13AQ9BXU3 409 aaPredicted RBP21.05■□□□□ 0.96
VAT1-205ENST00000587173 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
VAT1-205ENST00000587173 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
VAT1-205ENST00000587173 PHACTR3Q96KR7 559 aa21.04■□□□□ 0.96
VAT1-205ENST00000587173 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
VAT1-205ENST00000587173 ZNF330Q9Y3S2 320 aaPredicted RBP21.04■□□□□ 0.96
VAT1-205ENST00000587173 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
VAT1-205ENST00000587173 CARMIL3Q8ND23 1372 aa21.03■□□□□ 0.96
VAT1-205ENST00000587173 RASSF7Q02833 373 aa21.03■□□□□ 0.96
VAT1-205ENST00000587173 C2CD5Q86YS7 1000 aa21.03■□□□□ 0.96
VAT1-205ENST00000587173 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
VAT1-205ENST00000587173 APLP1P51693 650 aa21.02■□□□□ 0.96
VAT1-205ENST00000587173 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
VAT1-205ENST00000587173 KDM2BQ8NHM5 1336 aa21.02■□□□□ 0.95
VAT1-205ENST00000587173 AFDNP55196 1824 aaKnown RBP21.01■□□□□ 0.95
VAT1-205ENST00000587173 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
VAT1-205ENST00000587173 KCNQ3O43525 872 aa21.01■□□□□ 0.95
VAT1-205ENST00000587173 IL6STP40189 918 aaPredicted RBP21.01■□□□□ 0.95
VAT1-205ENST00000587173 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
VAT1-205ENST00000587173 TTLL6Q8N841 843 aa21.01■□□□□ 0.95
VAT1-205ENST00000587173 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
VAT1-205ENST00000587173 H0YIN7 160 aa21■□□□□ 0.95
VAT1-205ENST00000587173 A1BGP04217 495 aa21■□□□□ 0.95
VAT1-205ENST00000587173 RBM46Q8TBY0 533 aaKnown RBP21■□□□□ 0.95
VAT1-205ENST00000587173 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
VAT1-205ENST00000587173 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
VAT1-205ENST00000587173 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
VAT1-205ENST00000587173 NPM2Q86SE8 214 aaKnown RBP20.99■□□□□ 0.95
VAT1-205ENST00000587173 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
VAT1-205ENST00000587173 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
VAT1-205ENST00000587173 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
VAT1-205ENST00000587173 RRAGCQ9HB90 399 aa20.97■□□□□ 0.95
VAT1-205ENST00000587173 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
VAT1-205ENST00000587173 LMNB1P20700 586 aa20.96■□□□□ 0.95
VAT1-205ENST00000587173 PRR5LQ6MZQ0 368 aa20.96■□□□□ 0.95
VAT1-205ENST00000587173 MCM10Q7L590 875 aa20.96■□□□□ 0.95
VAT1-205ENST00000587173 CCDC24Q8N4L8 307 aa20.96■□□□□ 0.95
VAT1-205ENST00000587173 ZC3H4Q9UPT8 1303 aaKnown RBP20.96■□□□□ 0.95
VAT1-205ENST00000587173 DLEC1Q9Y238 1755 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 PDE6BP35913 854 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 PRELPP51888 382 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 ZNF622Q969S3 477 aaKnown RBP eCLIP20.95■□□□□ 0.94
VAT1-205ENST00000587173 BRIP1Q9BX63 1249 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
VAT1-205ENST00000587173 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
VAT1-205ENST00000587173 FSTL1Q12841 308 aa20.94■□□□□ 0.94
VAT1-205ENST00000587173 DZIP3Q86Y13 1208 aaKnown RBP20.94■□□□□ 0.94
VAT1-205ENST00000587173 SETDB2Q96T68 719 aa20.94■□□□□ 0.94
VAT1-205ENST00000587173 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
VAT1-205ENST00000587173 NFKBIEO00221 500 aa20.93■□□□□ 0.94
VAT1-205ENST00000587173 NPHP1O15259 732 aa20.93■□□□□ 0.94
VAT1-205ENST00000587173 IFFO2Q5TF58 517 aa20.93■□□□□ 0.94
VAT1-205ENST00000587173 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
VAT1-205ENST00000587173 SNRPA1P09661 255 aaKnown RBP20.92■□□□□ 0.94
VAT1-205ENST00000587173 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
VAT1-205ENST00000587173 SBF1O95248 1867 aa20.92■□□□□ 0.94
VAT1-205ENST00000587173 ST5P78524 1137 aa20.91■□□□□ 0.94
VAT1-205ENST00000587173 DNAJC5GQ8N7S2 189 aa20.91■□□□□ 0.94
VAT1-205ENST00000587173 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
VAT1-205ENST00000587173 TNRC6CQ9HCJ0 1690 aaKnown RBP20.9■□□□□ 0.94
VAT1-205ENST00000587173 GLTPD2A6NH11 291 aa20.9■□□□□ 0.94
VAT1-205ENST00000587173 C21orf2O43822 256 aa20.9■□□□□ 0.94
VAT1-205ENST00000587173 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
VAT1-205ENST00000587173 ANKRD31Q8N7Z5 1873 aa20.89■□□□□ 0.93
VAT1-205ENST00000587173 HTRA3P83110 453 aa20.88■□□□□ 0.93
VAT1-205ENST00000587173 SMC1BQ8NDV3 1235 aa20.88■□□□□ 0.93
VAT1-205ENST00000587173 NEFMP07197 916 aa20.87■□□□□ 0.93
VAT1-205ENST00000587173 VEGFAP15692 232 aaPredicted RBP20.87■□□□□ 0.93
VAT1-205ENST00000587173 STYK1Q6J9G0 422 aa20.87■□□□□ 0.93
VAT1-205ENST00000587173 CLEC4GQ6UXB4 293 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms