RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
SMAD4-203ENST00000585448 PSMA6P60900 246 aaKnown RBP8.64□□□□□ -1.03
SMAD4-203ENST00000585448 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
SMAD4-203ENST00000585448 POU4F2Q12837 409 aa8.64□□□□□ -1.03
SMAD4-203ENST00000585448 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
SMAD4-203ENST00000585448 VSIG8P0DPA2 414 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 IGFBP4P22692 258 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 SUPT16HQ9Y5B9 1047 aaKnown RBP8.63□□□□□ -1.03
SMAD4-203ENST00000585448 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
SMAD4-203ENST00000585448 H3BM21 787 aa8.62□□□□□ -1.03
SMAD4-203ENST00000585448 TERTO14746 1132 aaKnown RBP8.62□□□□□ -1.03
SMAD4-203ENST00000585448 PPFIA3O75145 1194 aa8.62□□□□□ -1.03
SMAD4-203ENST00000585448 WEE1P30291 646 aa8.62□□□□□ -1.03
SMAD4-203ENST00000585448 LBRQ14739 615 aaKnown RBP8.62□□□□□ -1.03
SMAD4-203ENST00000585448 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
SMAD4-203ENST00000585448 TSPAN10Q9H1Z9 355 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-203ENST00000585448 TIMMDC1Q9NPL8 285 aa8.62□□□□□ -1.03
SMAD4-203ENST00000585448 GPC6Q9Y625 555 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-203ENST00000585448 C21orf2O43822 256 aa8.61□□□□□ -1.03
SMAD4-203ENST00000585448 ITGA6P23229 1130 aa8.61□□□□□ -1.03
SMAD4-203ENST00000585448 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
SMAD4-203ENST00000585448 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
SMAD4-203ENST00000585448 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
SMAD4-203ENST00000585448 USTQ9Y2C2 406 aa8.61□□□□□ -1.03
SMAD4-203ENST00000585448 FOXO3O43524 673 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 F11P03951 625 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 RHOQP17081 205 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 NOS2P35228 1153 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
SMAD4-203ENST00000585448 GLIPR1L2Q4G1C9 344 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 ZDHHC1Q8WTX9 485 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
SMAD4-203ENST00000585448 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 H7C1W4 665 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 EML1O00423 815 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 DEKP35659 375 aaKnown RBP8.59□□□□□ -1.03
SMAD4-203ENST00000585448 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 C2orf49Q9BVC5 232 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-203ENST00000585448 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
SMAD4-203ENST00000585448 SERTM1A2A2V5 107 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 SLC16A10Q8TF71 515 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-203ENST00000585448 HINFPQ9BQA5 517 aa8.58□□□□□ -1.04
SMAD4-203ENST00000585448 ATP4AP20648 1035 aa8.57□□□□□ -1.04
SMAD4-203ENST00000585448 OCLNQ16625 522 aa8.57□□□□□ -1.04
SMAD4-203ENST00000585448 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-203ENST00000585448 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
SMAD4-203ENST00000585448 SCG3Q8WXD2 468 aaKnown RBP8.57□□□□□ -1.04
SMAD4-203ENST00000585448 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
SMAD4-203ENST00000585448 ARID3AQ99856 593 aa8.57□□□□□ -1.04
SMAD4-203ENST00000585448 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-203ENST00000585448 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
SMAD4-203ENST00000585448 MSX1P28360 303 aa8.56□□□□□ -1.04
SMAD4-203ENST00000585448 PDE4CQ08493 712 aa8.56□□□□□ -1.04
SMAD4-203ENST00000585448 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
SMAD4-203ENST00000585448 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
SMAD4-203ENST00000585448 TATP17735 454 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-203ENST00000585448 PHKA2P46019 1235 aa8.55□□□□□ -1.04
SMAD4-203ENST00000585448 NLRP8Q86W28 1048 aa8.55□□□□□ -1.04
SMAD4-203ENST00000585448 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-203ENST00000585448 IRF7Q92985 503 aa8.55□□□□□ -1.04
SMAD4-203ENST00000585448 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
SMAD4-203ENST00000585448 ZNF837Q96EG3 531 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-203ENST00000585448 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-203ENST00000585448 WFS1O76024 890 aa8.53□□□□□ -1.04
SMAD4-203ENST00000585448 UBAP2LQ14157 1087 aaKnown RBP8.53□□□□□ -1.04
SMAD4-203ENST00000585448 TBCELQ5QJ74 424 aa8.53□□□□□ -1.04
SMAD4-203ENST00000585448 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-203ENST00000585448 TXLNAP40222 546 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 DBN1Q16643 649 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 SV2AQ7L0J3 742 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 MYO19Q96H55 970 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
SMAD4-203ENST00000585448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMAD4-203ENST00000585448 CUEDC1Q9NWM3 386 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-203ENST00000585448 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 ZNF232Q9UNY5 417 aa8.52□□□□□ -1.05
SMAD4-203ENST00000585448 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
SMAD4-203ENST00000585448 THBS1P07996 1170 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 HIF1AQ16665 826 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 EFHC2Q5JST6 749 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 FIGNL1Q6PIW4 674 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
SMAD4-203ENST00000585448 FKBP5Q13451 457 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-203ENST00000585448 RTN1Q16799 776 aa8.5□□□□□ -1.05
SMAD4-203ENST00000585448 RIPOR1Q6ZS17 1223 aa8.5□□□□□ -1.05
SMAD4-203ENST00000585448 ALDH16A1Q8IZ83 802 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms