RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 C1orf216Q8TAB5 229 aa7.57□□□□□ -1.2
SKA2-210ENST00000584089 ZDHHC1Q8WTX9 485 aa7.57□□□□□ -1.2
SKA2-210ENST00000584089 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
SKA2-210ENST00000584089 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
SKA2-210ENST00000584089 SERTM1A2A2V5 107 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 H3BM21 787 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 C21orf2O43822 256 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
SKA2-210ENST00000584089 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 IGFBP4P22692 258 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 WEE1P30291 646 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 L3MBTL2Q969R5 705 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
SKA2-210ENST00000584089 ZDHHC3Q9NYG2 299 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
SKA2-210ENST00000584089 MSX1P28360 303 aa7.55□□□□□ -1.2
SKA2-210ENST00000584089 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
SKA2-210ENST00000584089 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
SKA2-210ENST00000584089 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
SKA2-210ENST00000584089 CLP1Q92989 425 aaKnown RBP7.55□□□□□ -1.2
SKA2-210ENST00000584089 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
SKA2-210ENST00000584089 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
SKA2-210ENST00000584089 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
SKA2-210ENST00000584089 H7C1W4 665 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 EML1O00423 815 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 LGR5O75473 907 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 VEGFBP49765 207 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 RIPOR1Q6ZS17 1223 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 C2orf49Q9BVC5 232 aaPredicted RBP7.54□□□□□ -1.2
SKA2-210ENST00000584089 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
SKA2-210ENST00000584089 CUEDC1Q9NWM3 386 aaPredicted RBP7.54□□□□□ -1.2
SKA2-210ENST00000584089 FOXO3O43524 673 aa7.53□□□□□ -1.2
SKA2-210ENST00000584089 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
SKA2-210ENST00000584089 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
SKA2-210ENST00000584089 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
SKA2-210ENST00000584089 CHMP7Q8WUX9 453 aaPredicted RBP7.53□□□□□ -1.2
SKA2-210ENST00000584089 TMEM88BA6NKF7 163 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 ATP4AP20648 1035 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
SKA2-210ENST00000584089 OCLNQ16625 522 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 C1orf53Q5VUE5 145 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 PGBD3Q8N328 593 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 IRF7Q92985 503 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
SKA2-210ENST00000584089 PRMT3O60678 531 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 WFS1O76024 890 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 TXLNAP40222 546 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 DBN1Q16643 649 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 SH3PXD2AQ5TCZ1 1133 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 PRIMPOLQ96LW4 560 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
SKA2-210ENST00000584089 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
SKA2-210ENST00000584089 CDC14CA4D256 554 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 PDE4CQ08493 712 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
SKA2-210ENST00000584089 EFHC2Q5JST6 749 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 ZNF837Q96EG3 531 aaPredicted RBP7.5□□□□□ -1.21
SKA2-210ENST00000584089 PHACTR1Q9C0D0 580 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
SKA2-210ENST00000584089 CXXC1Q9P0U4 656 aaPredicted RBP7.5□□□□□ -1.21
SKA2-210ENST00000584089 HCN4Q9Y3Q4 1203 aa7.5□□□□□ -1.21
SKA2-210ENST00000584089 FOXR1Q6PIV2 292 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 RETREG2Q8NC44 543 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 VTI1AQ96AJ9 217 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 ZIC5Q96T25 663 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.49□□□□□ -1.217e-8■■■■■ 186.3
SKA2-210ENST00000584089 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
SKA2-210ENST00000584089 A0A1W2PNR3 127 aa7.48□□□□□ -1.21
SKA2-210ENST00000584089 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
SKA2-210ENST00000584089 FKBP5Q13451 457 aaPredicted RBP7.48□□□□□ -1.21
SKA2-210ENST00000584089 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
SKA2-210ENST00000584089 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
SKA2-210ENST00000584089 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
SKA2-210ENST00000584089 THBS1P07996 1170 aa7.47□□□□□ -1.21
SKA2-210ENST00000584089 RTN1Q16799 776 aa7.47□□□□□ -1.21
SKA2-210ENST00000584089 FIGNL1Q6PIW4 674 aa7.47□□□□□ -1.21
SKA2-210ENST00000584089 GPR161Q8N6U8 529 aaKnown RBP7.47□□□□□ -1.21
SKA2-210ENST00000584089 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
SKA2-210ENST00000584089 GTPBP3Q969Y2 492 aaKnown RBP7.47□□□□□ -1.21
SKA2-210ENST00000584089 COL26A1Q96A83 441 aa7.47□□□□□ -1.21
SKA2-210ENST00000584089 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
SKA2-210ENST00000584089 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
SKA2-210ENST00000584089 NGLY1Q96IV0 654 aa7.46□□□□□ -1.22
SKA2-210ENST00000584089 NEUROD4Q9HD90 331 aa7.46□□□□□ -1.22
SKA2-210ENST00000584089 GJA3Q9Y6H8 435 aa7.46□□□□□ -1.22
SKA2-210ENST00000584089 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
SKA2-210ENST00000584089 SSFA2P28290 1259 aa7.45□□□□□ -1.22
SKA2-210ENST00000584089 HIF1AQ16665 826 aa7.45□□□□□ -1.22
SKA2-210ENST00000584089 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms